Evidence map›Paper›PMID 27208255›Full record

ArticlePlant physiology2016

Comparative Proteomics Analysis of Phloem Exudates Collected during the Induction of Systemic Acquired Resistance.

Philip Carella, Juliane Merl-Pham, Daniel C Wilson, Sanjukta Dey, Stefanie M Hauck, A Corina Vlot, Robin K Cameron

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed, 1 pooled it
11.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 1 synthesis or guideline pooled it, 65 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Philip CarellaDepartment of Biology, McMaster University, Hamilton, Ontario, Canada L8S 4K1 (P.C., D.C.W., R.K.C.); andResearch Unit Protein Science (J.M.-P., S.M.H.) and Department of Environmental Sciences, Institute of Biochemical Plant Pathology (S.D., A.C.V.), Helmholtz Zentrum Muenchen, Neuherberg, 85764 Munich, Germany.ORCID 0000-0002-5467-7290
Juliane Merl-PhamDepartment of Biology, McMaster University, Hamilton, Ontario, Canada L8S 4K1 (P.C., D.C.W., R.K.C.); andResearch Unit Protein Science (J.M.-P., S.M.H.) and Department of Environmental Sciences, Institute of Biochemical Plant Pathology (S.D., A.C.V.), Helmholtz Zentrum Muenchen, Neuherberg, 85764 Munich, Germany.ORCID 0000-0002-3422-4083
Daniel C WilsonDepartment of Biology, McMaster University, Hamilton, Ontario, Canada L8S 4K1 (P.C., D.C.W., R.K.C.); andResearch Unit Protein Science (J.M.-P., S.M.H.) and Department of Environmental Sciences, Institute of Biochemical Plant Pathology (S.D., A.C.V.), Helmholtz Zentrum Muenchen, Neuherberg, 85764 Munich, Germany.
Sanjukta DeyDepartment of Biology, McMaster University, Hamilton, Ontario, Canada L8S 4K1 (P.C., D.C.W., R.K.C.); andResearch Unit Protein Science (J.M.-P., S.M.H.) and Department of Environmental Sciences, Institute of Biochemical Plant Pathology (S.D., A.C.V.), Helmholtz Zentrum Muenchen, Neuherberg, 85764 Munich, Germany.
Stefanie M HauckDepartment of Biology, McMaster University, Hamilton, Ontario, Canada L8S 4K1 (P.C., D.C.W., R.K.C.); andResearch Unit Protein Science (J.M.-P., S.M.H.) and Department of Environmental Sciences, Institute of Biochemical Plant Pathology (S.D., A.C.V.), Helmholtz Zentrum Muenchen, Neuherberg, 85764 Munich, Germany.
A Corina VlotDepartment of Biology, McMaster University, Hamilton, Ontario, Canada L8S 4K1 (P.C., D.C.W., R.K.C.); andResearch Unit Protein Science (J.M.-P., S.M.H.) and Department of Environmental Sciences, Institute of Biochemical Plant Pathology (S.D., A.C.V.), Helmholtz Zentrum Muenchen, Neuherberg, 85764 Munich, Germany.
Robin K CameronDepartment of Biology, McMaster University, Hamilton, Ontario, Canada L8S 4K1 (P.C., D.C.W., R.K.C.); andResearch Unit Protein Science (J.M.-P., S.M.H.) and Department of Environmental Sciences, Institute of Biochemical Plant Pathology (S.D., A.C.V.), Helmholtz Zentrum Muenchen, Neuherberg, 85764 Munich, Germany rcamero@mcmaster.ca.
Helmholtz Zentrum München · DEMcMaster University · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Systemic acquired resistance (SAR) is a plant defense response that provides long-lasting, broad-spectrum pathogen resistance to uninfected systemic leaves following an initial localized infection. In Arabidopsis (Arabidopsis thaliana), local infection with virulent or avirulent strains of Pseudomonas syringae pv tomato generates long-distance SAR signals that travel from locally infected to distant leaves through the phloem to establish SAR In this study, a proteomics approach was used to identify proteins that accumulate in phloem exudates in response to the induction of SAR To accomplish this, phloem exudates collected from mock-inoculated or SAR-induced leaves of wild-type Columbia-0 plants were subjected to label-free quantitative liquid chromatography-tandem mass spectrometry proteomics. Comparing mock- and SAR-induced phloem exudate proteomes, 16 proteins were enriched in phloem exudates collected from SAR-induced plants, while 46 proteins were suppressed. SAR-related proteins THIOREDOXIN h3, ACYL-COENZYME A-BINDING PROTEIN6, and PATHOGENESIS-RELATED1 were enriched in phloem exudates of SAR-induced plants, demonstrating the strength of this approach and suggesting a role for these proteins in the phloem during SAR To identify novel components of SAR, transfer DNA mutants of differentially abundant phloem proteins were assayed for SAR competence. This analysis identified a number of new proteins (m-type thioredoxins, major latex protein-like protein, ULTRAVIOLET-B RESISTANCE8 photoreceptor) that contribute to the SAR response. The Arabidopsis SAR phloem proteome is a valuable resource for understanding SAR long-distance signaling and the dynamic nature of the phloem during plant-pathogen interactions.

Indexed as

Immunity, InnateArabidopsisArabidopsis ProteinsGene OntologyPhloemPlant DiseasesPlant ExudatesProteomeProteomicsReproducibility of ResultsSignal TransductionUltraviolet RaysArabidopsis ProteinsPlant ExudatesProteome

Identifiers

PMID27208255
PMCPMC4902610
OpenAlexW2338936834

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.