Evidence map›Paper›PMID 27208245›Full record

ArticlePlant physiology2016

Auxin Biosynthesis: Are the Indole-3-Acetic Acid and Phenylacetic Acid Biosynthesis Pathways Mirror Images?

Sam D Cook, David S Nichols, Jason Smith, Prem S Chourey, Erin L McAdam, Laura Quittenden, John J Ross

Open access · greenAbstract read
In one paragraph

Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
15.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Article
  3. The auxin gatekeepers: Evolution and diversification of the YUCCA family.The Plant journal : for cell and molecular biology · 2025
    Article
  4. Article
  5. Auxin homeostasis: new roads in a tight network.Journal of experimental botany · 2025
    Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Maize specialized metabolome networks reveal organ-preferential mixed glycosides.Computational and structural biotechnology journal · 2021
    Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Sam D CookSchool of Biological Sciences (S.D.C., E.L.M., L.Q., J.J.R.), Central Science Laboratory (D.S.N.), School of Chemistry (J.S.), University of Tasmania, Sandy Bay, Tasmania, Australia, 7005; and U.S. Department of Agriculture, Agricultural Research Service, Gainesville, Florida 32608 (P.S.C.).ORCID 0000-0003-0950-6131
David S NicholsSchool of Biological Sciences (S.D.C., E.L.M., L.Q., J.J.R.), Central Science Laboratory (D.S.N.), School of Chemistry (J.S.), University of Tasmania, Sandy Bay, Tasmania, Australia, 7005; and U.S. Department of Agriculture, Agricultural Research Service, Gainesville, Florida 32608 (P.S.C.).
Jason SmithSchool of Biological Sciences (S.D.C., E.L.M., L.Q., J.J.R.), Central Science Laboratory (D.S.N.), School of Chemistry (J.S.), University of Tasmania, Sandy Bay, Tasmania, Australia, 7005; and U.S. Department of Agriculture, Agricultural Research Service, Gainesville, Florida 32608 (P.S.C.).
Prem S ChoureySchool of Biological Sciences (S.D.C., E.L.M., L.Q., J.J.R.), Central Science Laboratory (D.S.N.), School of Chemistry (J.S.), University of Tasmania, Sandy Bay, Tasmania, Australia, 7005; and U.S. Department of Agriculture, Agricultural Research Service, Gainesville, Florida 32608 (P.S.C.).
Erin L McAdamSchool of Biological Sciences (S.D.C., E.L.M., L.Q., J.J.R.), Central Science Laboratory (D.S.N.), School of Chemistry (J.S.), University of Tasmania, Sandy Bay, Tasmania, Australia, 7005; and U.S. Department of Agriculture, Agricultural Research Service, Gainesville, Florida 32608 (P.S.C.).
Laura QuittendenSchool of Biological Sciences (S.D.C., E.L.M., L.Q., J.J.R.), Central Science Laboratory (D.S.N.), School of Chemistry (J.S.), University of Tasmania, Sandy Bay, Tasmania, Australia, 7005; and U.S. Department of Agriculture, Agricultural Research Service, Gainesville, Florida 32608 (P.S.C.).
John J RossSchool of Biological Sciences (S.D.C., E.L.M., L.Q., J.J.R.), Central Science Laboratory (D.S.N.), School of Chemistry (J.S.), University of Tasmania, Sandy Bay, Tasmania, Australia, 7005; and U.S. Department of Agriculture, Agricultural Research Service, Gainesville, Florida 32608 (P.S.C.) john.ross@utas.edu.au.ORCID 0000-0003-3665-2062
University of Tasmania · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The biosynthesis of the main auxin in plants (indole-3-acetic acid [IAA]) has been elucidated recently and is thought to involve the sequential conversion of Trp to indole-3-pyruvic acid to IAA However, the pathway leading to a less well studied auxin, phenylacetic acid (PAA), remains unclear. Here, we present evidence from metabolism experiments that PAA is synthesized from the amino acid Phe, via phenylpyruvate. In pea (Pisum sativum), the reverse reaction, phenylpyruvate to Phe, is also demonstrated. However, despite similarities between the pathways leading to IAA and PAA, evidence from mutants in pea and maize (Zea mays) indicate that IAA biosynthetic enzymes are not the main enzymes for PAA biosynthesis. Instead, we identified a putative aromatic aminotransferase (PsArAT) from pea that may function in the PAA synthesis pathway.

Indexed as

Biosynthetic PathwaysChromatography, High Pressure LiquidEnzyme AssaysGenes, PlantIndoleacetic AcidsIndolesMass SpectrometryMutationPhenylacetatesPhenylalaninePisum sativumPlant ProteinsTryptophanZea maysindol-3-yl pyruvic acidindoleacetic acidIndoleacetic AcidsIndolesPhenylacetatesphenylacetic acidPhenylalaninePlant ProteinsTryptophan

Identifiers

PMID27208245
PMCPMC4902625
OpenAlexW2342446468

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.