Evidence map›Paper›PMID 27208227›Full record

ArticlePlant physiology2016

Circadian and Plastid Signaling Pathways Are Integrated to Ensure Correct Expression of the CBF and COR Genes during Photoperiodic Growth.

Louise Norén, Peter Kindgren, Paulina Stachula, Mark Rühl, Maria E Eriksson, Vaughan Hurry, Åsa Strand

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
13.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 40 citations in OpenAlex.

  1. Review
  2. A Critical Review of Recent Advances in Maize Stress Molecular Biology.International journal of molecular sciences · 2024
    Review
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  15. Review
  16. Review
  17. A Chloroplast COR413 Protein FromFrontiers in plant science · 2020
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Louise NorénUmeå Plant Science Centre, Department of Plant Physiology, Umeå University, SE-901 87 Umea, Sweden.
Peter KindgrenUmeå Plant Science Centre, Department of Plant Physiology, Umeå University, SE-901 87 Umea, Sweden.ORCID 0000-0003-0947-2648
Paulina StachulaUmeå Plant Science Centre, Department of Plant Physiology, Umeå University, SE-901 87 Umea, Sweden.ORCID 0000-0002-7476-1043
Mark RühlUmeå Plant Science Centre, Department of Plant Physiology, Umeå University, SE-901 87 Umea, Sweden.ORCID 0000-0002-2661-5535
Maria E ErikssonUmeå Plant Science Centre, Department of Plant Physiology, Umeå University, SE-901 87 Umea, Sweden.ORCID 0000-0003-2038-4892
Vaughan HurryUmeå Plant Science Centre, Department of Plant Physiology, Umeå University, SE-901 87 Umea, Sweden.ORCID 0000-0001-5151-5184
Åsa StrandUmeå Plant Science Centre, Department of Plant Physiology, Umeå University, SE-901 87 Umea, Sweden asa.strand@umu.se.ORCID 0000-0001-6664-0471
Umeå University · SEUmeå Plant Science Centre · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The circadian clock synchronizes a wide range of biological processes with the day/night cycle, and correct circadian regulation is essential for photosynthetic activity and plant growth. We describe here a mechanism where a plastid signal converges with the circadian clock to fine-tune the regulation of nuclear gene expression in Arabidopsis (Arabidopsis thaliana). Diurnal oscillations of tetrapyrrole levels in the chloroplasts contribute to the regulation of the nucleus-encoded transcription factors C-REPEAT BINDING FACTORS (CBFs). The plastid signal triggered by tetrapyrrole accumulation inhibits the activity of cytosolic HEAT SHOCK PROTEIN90 and, as a consequence, the maturation and stability of the clock component ZEITLUPE (ZTL). ZTL negatively regulates the transcription factor LONG HYPOCOTYL5 (HY5) and PSEUDO-RESPONSE REGULATOR5 (PRR5). Thus, low levels of ZTL result in a HY5- and PRR5-mediated repression of CBF3 and PRR5-mediated repression of CBF1 and CBF2 expression. The plastid signal thereby contributes to the rhythm of CBF expression and the downstream COLD RESPONSIVE expression during day/night cycles. These findings provide insight into how plastid signals converge with, and impact upon, the activity of well-defined clock components involved in circadian regulation.

Indexed as

Gene Expression Regulation, PlantGenes, PlantPhotoperiodArabidopsisArabidopsis ProteinsCircadian RhythmEstersGene Expression Regulation, DevelopmentalHSP90 Heat-Shock ProteinsMagnesiumModels, BiologicalMutationPlastidsPromoter Regions, GeneticProtein BindingProteolysisArabidopsis ProteinsEstersHSP90 Heat-Shock ProteinsMagnesiumprotoporphyrin IXProtoporphyrinsTetrapyrroles

Identifiers

PMID27208227
PMCPMC4902621
OpenAlexW2411306374

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.