Evidence map›Paper›PMID 27208226›Full record

ArticlePlant physiology2016

A Homolog of Blade-On-Petiole 1 and 2 (BOP1/2) Controls Internode Length and Homeotic Changes of the Barley Inflorescence.

Matthias Jost, Shin Taketa, Martin Mascher, Axel Himmelbach, Takahisa Yuo, Fahimeh Shahinnia, Twan Rutten, Arnis Druka, Thomas Schmutzer, Burkhard Steuernagel and 6 more

Abstract read
In one paragraph

Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. International journal of molecular sciences · 2023
    Article
  7. Regulation of secondary growth by poplarFrontiers in plant science · 2023
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. International journal of molecular sciences · 2021
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Frontiers in plant science · 2021
    Article
  18. Review
  19. APETALA2 control of barley internode elongation.Development (Cambridge, England) · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Matthias JostLeibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, 06466 Stadt Seeland, Germany (M.J., Ma.M., A.H., F.S., T.R., T.S., B.S., S.B., U.S., N.S.);Institute of Plant Science and Resources, Okayama University, Okayama 710-0046, Japan (Sh.T., T.Y.);James Hutton Institute, Invergowrie, Dundee DD2 5DA, United Kingdom (A.D., R.W.);Leibniz Institute on Aging and Fritz-Lipmann Institute, 07745 Jena, Germany (St.T.);Applied Genomics Institute, University of Udine, 33100 Udine, Italy (Mi.M.); andDivision of Plant Sciences, University of Dundee, Dundee DD1 4HN, United Kingdom (R.W.).ORCID 0000-0001-8796-1768
Shin TaketaLeibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, 06466 Stadt Seeland, Germany (M.J., Ma.M., A.H., F.S., T.R., T.S., B.S., S.B., U.S., N.S.);Institute of Plant Science and Resources, Okayama University, Okayama 710-0046, Japan (Sh.T., T.Y.);James Hutton Institute, Invergowrie, Dundee DD2 5DA, United Kingdom (A.D., R.W.);Leibniz Institute on Aging and Fritz-Lipmann Institute, 07745 Jena, Germany (St.T.);Applied Genomics Institute, University of Udine, 33100 Udine, Italy (Mi.M.); andDivision of Plant Sciences, University of Dundee, Dundee DD1 4HN, United Kingdom (R.W.).
Martin MascherLeibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, 06466 Stadt Seeland, Germany (M.J., Ma.M., A.H., F.S., T.R., T.S., B.S., S.B., U.S., N.S.);Institute of Plant Science and Resources, Okayama University, Okayama 710-0046, Japan (Sh.T., T.Y.);James Hutton Institute, Invergowrie, Dundee DD2 5DA, United Kingdom (A.D., R.W.);Leibniz Institute on Aging and Fritz-Lipmann Institute, 07745 Jena, Germany (St.T.);Applied Genomics Institute, University of Udine, 33100 Udine, Italy (Mi.M.); andDivision of Plant Sciences, University of Dundee, Dundee DD1 4HN, United Kingdom (R.W.).
Axel HimmelbachLeibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, 06466 Stadt Seeland, Germany (M.J., Ma.M., A.H., F.S., T.R., T.S., B.S., S.B., U.S., N.S.);Institute of Plant Science and Resources, Okayama University, Okayama 710-0046, Japan (Sh.T., T.Y.);James Hutton Institute, Invergowrie, Dundee DD2 5DA, United Kingdom (A.D., R.W.);Leibniz Institute on Aging and Fritz-Lipmann Institute, 07745 Jena, Germany (St.T.);Applied Genomics Institute, University of Udine, 33100 Udine, Italy (Mi.M.); andDivision of Plant Sciences, University of Dundee, Dundee DD1 4HN, United Kingdom (R.W.).ORCID 0000-0001-7338-0946
Takahisa YuoLeibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, 06466 Stadt Seeland, Germany (M.J., Ma.M., A.H., F.S., T.R., T.S., B.S., S.B., U.S., N.S.);Institute of Plant Science and Resources, Okayama University, Okayama 710-0046, Japan (Sh.T., T.Y.);James Hutton Institute, Invergowrie, Dundee DD2 5DA, United Kingdom (A.D., R.W.);Leibniz Institute on Aging and Fritz-Lipmann Institute, 07745 Jena, Germany (St.T.);Applied Genomics Institute, University of Udine, 33100 Udine, Italy (Mi.M.); andDivision of Plant Sciences, University of Dundee, Dundee DD1 4HN, United Kingdom (R.W.).
Fahimeh ShahinniaLeibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, 06466 Stadt Seeland, Germany (M.J., Ma.M., A.H., F.S., T.R., T.S., B.S., S.B., U.S., N.S.);Institute of Plant Science and Resources, Okayama University, Okayama 710-0046, Japan (Sh.T., T.Y.);James Hutton Institute, Invergowrie, Dundee DD2 5DA, United Kingdom (A.D., R.W.);Leibniz Institute on Aging and Fritz-Lipmann Institute, 07745 Jena, Germany (St.T.);Applied Genomics Institute, University of Udine, 33100 Udine, Italy (Mi.M.); andDivision of Plant Sciences, University of Dundee, Dundee DD1 4HN, United Kingdom (R.W.).ORCID 0000-0001-8236-7647
Twan RuttenLeibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, 06466 Stadt Seeland, Germany (M.J., Ma.M., A.H., F.S., T.R., T.S., B.S., S.B., U.S., N.S.);Institute of Plant Science and Resources, Okayama University, Okayama 710-0046, Japan (Sh.T., T.Y.);James Hutton Institute, Invergowrie, Dundee DD2 5DA, United Kingdom (A.D., R.W.);Leibniz Institute on Aging and Fritz-Lipmann Institute, 07745 Jena, Germany (St.T.);Applied Genomics Institute, University of Udine, 33100 Udine, Italy (Mi.M.); andDivision of Plant Sciences, University of Dundee, Dundee DD1 4HN, United Kingdom (R.W.).ORCID 0000-0001-5891-6503
Arnis DrukaLeibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, 06466 Stadt Seeland, Germany (M.J., Ma.M., A.H., F.S., T.R., T.S., B.S., S.B., U.S., N.S.);Institute of Plant Science and Resources, Okayama University, Okayama 710-0046, Japan (Sh.T., T.Y.);James Hutton Institute, Invergowrie, Dundee DD2 5DA, United Kingdom (A.D., R.W.);Leibniz Institute on Aging and Fritz-Lipmann Institute, 07745 Jena, Germany (St.T.);Applied Genomics Institute, University of Udine, 33100 Udine, Italy (Mi.M.); andDivision of Plant Sciences, University of Dundee, Dundee DD1 4HN, United Kingdom (R.W.).ORCID 0000-0003-3663-2694
Thomas SchmutzerLeibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, 06466 Stadt Seeland, Germany (M.J., Ma.M., A.H., F.S., T.R., T.S., B.S., S.B., U.S., N.S.);Institute of Plant Science and Resources, Okayama University, Okayama 710-0046, Japan (Sh.T., T.Y.);James Hutton Institute, Invergowrie, Dundee DD2 5DA, United Kingdom (A.D., R.W.);Leibniz Institute on Aging and Fritz-Lipmann Institute, 07745 Jena, Germany (St.T.);Applied Genomics Institute, University of Udine, 33100 Udine, Italy (Mi.M.); andDivision of Plant Sciences, University of Dundee, Dundee DD1 4HN, United Kingdom (R.W.).ORCID 0000-0003-1073-6719
Burkhard SteuernagelLeibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, 06466 Stadt Seeland, Germany (M.J., Ma.M., A.H., F.S., T.R., T.S., B.S., S.B., U.S., N.S.);Institute of Plant Science and Resources, Okayama University, Okayama 710-0046, Japan (Sh.T., T.Y.);James Hutton Institute, Invergowrie, Dundee DD2 5DA, United Kingdom (A.D., R.W.);Leibniz Institute on Aging and Fritz-Lipmann Institute, 07745 Jena, Germany (St.T.);Applied Genomics Institute, University of Udine, 33100 Udine, Italy (Mi.M.); andDivision of Plant Sciences, University of Dundee, Dundee DD1 4HN, United Kingdom (R.W.).ORCID 0000-0002-8284-7728
Sebastian BeierLeibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, 06466 Stadt Seeland, Germany (M.J., Ma.M., A.H., F.S., T.R., T.S., B.S., S.B., U.S., N.S.);Institute of Plant Science and Resources, Okayama University, Okayama 710-0046, Japan (Sh.T., T.Y.);James Hutton Institute, Invergowrie, Dundee DD2 5DA, United Kingdom (A.D., R.W.);Leibniz Institute on Aging and Fritz-Lipmann Institute, 07745 Jena, Germany (St.T.);Applied Genomics Institute, University of Udine, 33100 Udine, Italy (Mi.M.); andDivision of Plant Sciences, University of Dundee, Dundee DD1 4HN, United Kingdom (R.W.).
Stefan TaudienLeibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, 06466 Stadt Seeland, Germany (M.J., Ma.M., A.H., F.S., T.R., T.S., B.S., S.B., U.S., N.S.);Institute of Plant Science and Resources, Okayama University, Okayama 710-0046, Japan (Sh.T., T.Y.);James Hutton Institute, Invergowrie, Dundee DD2 5DA, United Kingdom (A.D., R.W.);Leibniz Institute on Aging and Fritz-Lipmann Institute, 07745 Jena, Germany (St.T.);Applied Genomics Institute, University of Udine, 33100 Udine, Italy (Mi.M.); andDivision of Plant Sciences, University of Dundee, Dundee DD1 4HN, United Kingdom (R.W.).
Uwe ScholzLeibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, 06466 Stadt Seeland, Germany (M.J., Ma.M., A.H., F.S., T.R., T.S., B.S., S.B., U.S., N.S.);Institute of Plant Science and Resources, Okayama University, Okayama 710-0046, Japan (Sh.T., T.Y.);James Hutton Institute, Invergowrie, Dundee DD2 5DA, United Kingdom (A.D., R.W.);Leibniz Institute on Aging and Fritz-Lipmann Institute, 07745 Jena, Germany (St.T.);Applied Genomics Institute, University of Udine, 33100 Udine, Italy (Mi.M.); andDivision of Plant Sciences, University of Dundee, Dundee DD1 4HN, United Kingdom (R.W.).ORCID 0000-0001-6113-3518
Michele MorganteLeibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, 06466 Stadt Seeland, Germany (M.J., Ma.M., A.H., F.S., T.R., T.S., B.S., S.B., U.S., N.S.);Institute of Plant Science and Resources, Okayama University, Okayama 710-0046, Japan (Sh.T., T.Y.);James Hutton Institute, Invergowrie, Dundee DD2 5DA, United Kingdom (A.D., R.W.);Leibniz Institute on Aging and Fritz-Lipmann Institute, 07745 Jena, Germany (St.T.);Applied Genomics Institute, University of Udine, 33100 Udine, Italy (Mi.M.); andDivision of Plant Sciences, University of Dundee, Dundee DD1 4HN, United Kingdom (R.W.).
Robbie WaughLeibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, 06466 Stadt Seeland, Germany (M.J., Ma.M., A.H., F.S., T.R., T.S., B.S., S.B., U.S., N.S.);Institute of Plant Science and Resources, Okayama University, Okayama 710-0046, Japan (Sh.T., T.Y.);James Hutton Institute, Invergowrie, Dundee DD2 5DA, United Kingdom (A.D., R.W.);Leibniz Institute on Aging and Fritz-Lipmann Institute, 07745 Jena, Germany (St.T.);Applied Genomics Institute, University of Udine, 33100 Udine, Italy (Mi.M.); andDivision of Plant Sciences, University of Dundee, Dundee DD1 4HN, United Kingdom (R.W.).ORCID 0000-0003-1045-3065
Nils SteinLeibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, 06466 Stadt Seeland, Germany (M.J., Ma.M., A.H., F.S., T.R., T.S., B.S., S.B., U.S., N.S.);Institute of Plant Science and Resources, Okayama University, Okayama 710-0046, Japan (Sh.T., T.Y.);James Hutton Institute, Invergowrie, Dundee DD2 5DA, United Kingdom (A.D., R.W.);Leibniz Institute on Aging and Fritz-Lipmann Institute, 07745 Jena, Germany (St.T.);Applied Genomics Institute, University of Udine, 33100 Udine, Italy (Mi.M.); andDivision of Plant Sciences, University of Dundee, Dundee DD1 4HN, United Kingdom (R.W.) stein@ipk-gatersleben.de.ORCID 0000-0003-3011-8731

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Inflorescence architecture in small-grain cereals has a direct effect on yield and is an important selection target in breeding for yield improvement. We analyzed the recessive mutation laxatum-a (lax-a) in barley (Hordeum vulgare), which causes pleiotropic changes in spike development, resulting in (1) extended rachis internodes conferring a more relaxed inflorescence, (2) broadened base of the lemma awns, (3) thinner grains that are largely exposed due to reduced marginal growth of the palea and lemma, and (4) and homeotic conversion of lodicules into two stamenoid structures. Map-based cloning enforced by mapping-by-sequencing of the mutant lax-a locus enabled the identification of a homolog of BLADE-ON-PETIOLE1 (BOP1) and BOP2 as the causal gene. Interestingly, the recently identified barley uniculme4 gene also is a BOP1/2 homolog and has been shown to regulate tillering and leaf sheath development. While the Arabidopsis (Arabidopsis thaliana) BOP1 and BOP2 genes act redundantly, the barley genes contribute independent effects in specifying the developmental growth of vegetative and reproductive organs, respectively. Analysis of natural genetic diversity revealed strikingly different haplotype diversity for the two paralogous barley genes, likely affected by the respective genomic environments, since no indication for an active selection process was detected.

Indexed as

Genes, HomeoboxGenes, PlantSequence Homology, Amino AcidArabidopsis ProteinsBase PairingChromosome MappingCloning, MolecularEcotypeGenetic VariationHordeumInflorescenceMolecular Sequence AnnotationMutationPhenotypePhylogenyPlants, Genetically ModifiedArabidopsis Proteins

Identifiers

PMID27208226
PMCPMC4902598

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