Evidence map›Paper›PMID 27207957›Full record

ArticleG3 (Bethesda, Md.)2016

Cilia-Associated Genes Play Differing Roles in Aminoglycoside-Induced Hair Cell Death in Zebrafish.

Tamara M Stawicki, Liana Hernandez, Robert Esterberg, Tor Linbo, Kelly N Owens, Arish N Shah, Nihal Thapa, Brock Roberts, Cecilia B Moens, Edwin W Rubel and 1 more

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Hair cell toxicology: With the help of a little fish.Frontiers in cell and developmental biology · 2022
    Review
  8. Zebrafish models of inherited retinal dystrophies.Journal of translational genetics and genomics · 2022
    Article
  9. Article
  10. Review
  11. Article
  12. Cilia in the developing zebrafish ear.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Water Waves to Sound Waves: Using Zebrafish to Explore Hair Cell Biology.Journal of the Association for Research in Otolaryngology : JARO · 2019
    Review
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Tamara M StawickiDepartment of Biological Structure, University of Washington, Seattle, Washington 98195 Virginia Merrill Bloedel Hearing Research Center, University of Washington, Seattle, Washington 98195.
Liana HernandezDepartment of Biological Structure, University of Washington, Seattle, Washington 98195.
Robert EsterbergVirginia Merrill Bloedel Hearing Research Center, University of Washington, Seattle, Washington 98195 Department of Otolaryngology, Head and Neck Surgery, University of Washington, Seattle, Washington, 98195.
Tor LinboDepartment of Biological Structure, University of Washington, Seattle, Washington 98195.
Kelly N OwensDepartment of Biological Structure, University of Washington, Seattle, Washington 98195 Virginia Merrill Bloedel Hearing Research Center, University of Washington, Seattle, Washington 98195 Department of Otolaryngology, Head and Neck Surgery, University of Washington, Seattle, Washington, 98195.
Arish N ShahDivision of Basic Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington, 98109.
Nihal ThapaDepartment of Biological Structure, University of Washington, Seattle, Washington 98195.
Brock RobertsDepartment of Biological Structure, University of Washington, Seattle, Washington 98195.
Cecilia B MoensDivision of Basic Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington, 98109.
Edwin W RubelVirginia Merrill Bloedel Hearing Research Center, University of Washington, Seattle, Washington 98195 Department of Otolaryngology, Head and Neck Surgery, University of Washington, Seattle, Washington, 98195.
David W RaibleDepartment of Biological Structure, University of Washington, Seattle, Washington 98195 Virginia Merrill Bloedel Hearing Research Center, University of Washington, Seattle, Washington 98195 draible@uw.edu.
University of Washington · USFred Hutch Cancer Center · US

Funding

Genetics of Zebrafish Hair Cell ToxicityR01DC005987 · NIDCD · UNIVERSITY OF WASHINGTON · PI RAIBLE, DAVID W · 2003 to 2023
$9.8M
Intellectual and Developmental Disabilities Research CenterU54HD083091 · NICHD · UNIVERSITY OF WASHINGTON · PI GARDEN, GWENN A · 2014 to 2019
$7.9M
Mechanisms of Tangential Neuron MigrationR01NS082567 · NINDS · FRED HUTCHINSON CANCER RESEARCH CENTER · PI MOENS, CECILIA B · 2013 to 2017
$2.1M
TILLING the Zebrafish Genome: A Reverse Genetics ApproachR01HD076585 · NICHD · FRED HUTCHINSON CANCER RESEARCH CENTER · PI MOENS, CECILIA B, SOLNICAKREZEL, LILIANNA · 2012 to 2014
$1.9M
Retrograde intraflagellar transport genes in aminoglycoside-induced hair cell deathR03DC015080 · NIDCD · UNIVERSITY OF WASHINGTON · PI STAWICKI, TAMARA M · 2015 to 2017
$431k
NICHD NIH HHS R01 HD076585NICHD NIH HHS U54 HD083091NIDCD NIH HHS R01 DC005987NIDCD NIH HHS R03 DC015080NINDS NIH HHS R01 NS082567
6 · The paper itself

Abstract

Hair cells possess a single primary cilium, called the kinocilium, early in development. While the kinocilium is lost in auditory hair cells of most species it is maintained in vestibular hair cells. It has generally been believed that the primary role of the kinocilium and cilia-associated genes in hair cells is in the establishment of the polarity of actin-based stereocilia, the hair cell mechanotransduction apparatus. Through genetic screening and testing of candidate genes in zebrafish (Danio rerio) we have found that mutations in multiple cilia genes implicated in intraflagellar transport (dync2h1, wdr35, ift88, and traf3ip), and the ciliary transition zone (cc2d2a, mks1, and cep290) lead to resistance to aminoglycoside-induced hair cell death. These genes appear to have differing roles in hair cells, as mutations in intraflagellar transport genes, but not transition zone genes, lead to defects in kinocilia formation and processes dependent upon hair cell mechanotransduction activity. These mutants highlight a novel role of cilia-associated genes in hair cells, and provide powerful tools for further study.

Indexed as

MutationAminoglycosidesAnimalsCell DeathCiliaCytoplasmic DyneinsDrug ToleranceGene ExpressionHair Cells, AuditoryMechanotransduction, CellularMicrotubule-Associated ProteinsVesicular Transport ProteinsZebrafishZebrafish ProteinsAminoglycosidesCC2D2A protein, zebrafishCEP290 protein, zebrafishCytoplasmic DyneinsMicrotubule-Associated ProteinsVesicular Transport ProteinsZebrafish Proteinsaminoglycosidesciliahair cellsintraflagellar transporttransition zone

Identifiers

PMID27207957
PMCPMC4938675
OpenAlexW2402799293

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.