Evidence map›Paper›PMID 27207655›Full record

ArticleCarcinogenesis2016

Selected single-nucleotide polymorphisms in FOXE1, SERPINA5, FTO, EVPL, TICAM1 and SCARB1 are associated with papillary and follicular thyroid cancer risk: replication study in a German population.

Alice J Sigurdson, Alina V Brenner, James A Roach, Lilia Goudeva, Jörg A Müller, Kai Nerlich, Christoph Reiners, Robert Schwab, Liliane Pfeiffer, Melanie Waldenberger and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in Carcinogenesis, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 1 pooled it
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 1 synthesis or guideline pooled it, 40 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. [Association of gene polymorphisms ofZhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics · 2023
    Article
  7. Article
  8. Review
  9. Cell cycle (Georgetown, Tex.) · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. No Association BetweenPharmacogenomics and personalized medicine · 2021
    Article
  15. Article
  16. Review
  17. Journal of oncology · 2021
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 9 institutions in 3 countries.

Alice J Sigurdson
Alina V Brenner
James A Roach
Lilia GoudevaDepartment of Transfusion Medicine and.
Jörg A MüllerDepartment of Nuclear Medicine, Hannover Medical School, Hannover, Germany.
Kai NerlichDepartment of Nuclear Medicine, University Hospital Würzburg, Würzburg, Germany.
Christoph ReinersDepartment of Nuclear Medicine, University Hospital Würzburg, Würzburg, Germany.
Robert SchwabDepartment of Surgery, Federal Armed Forces Hospital, Koblenz, Germany.
Liliane PfeifferResearch Unit of Molecular Epidemiology and.
Melanie WaldenbergerResearch Unit of Molecular Epidemiology and.
Melissa Braganza
Li XuDepartment of Head and Neck Surgery, The University of Texas M.D. Anderson Cancer Center, Houston, TX 77030, USA.
Erich M SturgisDepartment of Head and Neck Surgery, The University of Texas M.D. Anderson Cancer Center, Houston, TX 77030, USA.
Meredith YeagerLaboratory of Translational Genetics and.
Stephen J ChanockLaboratory of Translational Genetics and.
Ruth M PfeifferBiostatistics Branch, Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, MD 20892, USA.
Michael AbendBundeswehr Institute of Radiobiology, University of Ulm, Neuherbergstr. 11, Munich 80937, Germany and.
Matthias PortDepartment of Hematology, Hemostasis, Oncology and Stem Cell Transplantation, Hannover Medical School, Hannover, Germany.
Medizinische Hochschule Hannover · DENational Cancer Institute · USThe University of Texas MD Anderson Cancer Center · USUniversitätsklinikum Würzburg · DEBundeswehrzentralkrankenhaus Koblenz · DEDivision of Cancer Epidemiology and GeneticsHelmholtz Zentrum München · DEMRC Epidemiology Unit · GBUniversität der Bundeswehr München · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Several single-nucleotide polymorphisms (SNPs) have been associated with papillary and follicular thyroid cancer (PTC and FTC, respectively) risk, but few have replicated. After analyzing 17525 tag SNPs in 1129 candidate genes, we found associations with PTC risk in SERPINA5, FTO, HEMGN (near FOXE1) and other genes. Here, we report results from a replication effort in a large independent PTC/FTC case-control study conducted in Germany. We evaluated the best tagging SNPs from our previous PTC study and additionally included SNPs in or near FOXE1 and NKX2-1 genes, known susceptibility loci for thyroid cancer. We genotyped 422 PTC and 130 FTC cases and 752 controls recruited from three German clinical centers. We used polytomous logistic regression to simultaneously estimate PTC and FTC associations for 79 SNPs based on log-additive models. We assessed effect modification by body mass index (BMI), gender and age for all SNPs, and selected SNP by SNP interactions. We confirmed associations with PTC and SNPs in FOXE1/HEMGN, SERPINA5 (rs2069974), FTO (rs8047395), EVPL (rs2071194), TICAM1 (rs8120) and SCARB1 (rs11057820) genes. We found associations with SNPs in FOXE1, SERPINA5, FTO, TICAM1 and HSPA6 and FTC. We found two significant interactions between FTO (rs8047395) and BMI (P = 0.0321) and between TICAM1 (rs8120) and FOXE1 (rs10984377) (P = 0.0006). Besides the known associations with FOXE1 SNPs, we confirmed additional PTC SNP associations reported previously. We also found several new associations with FTC risk and noteworthy interactions. We conclude that multiple variants and host factors might interact in complex ways to increase risk of PTC and FTC.

Indexed as

Adaptor Proteins, Vesicular TransportAdenocarcinoma, FollicularAdultAgedAlpha-Ketoglutarate-Dependent Dioxygenase FTOCarcinomaCarcinoma, PapillaryFemaleForkhead Transcription FactorsGenetic Association StudiesGenetic Predisposition to DiseaseGenotypeGermanyHumansMaleMiddle AgedAdaptor Proteins, Vesicular TransportAlpha-Ketoglutarate-Dependent Dioxygenase FTOForkhead Transcription FactorsFOXE1 protein, humanFTO protein, humanProtein C InhibitorSCARB1 protein, humanScavenger Receptors, Class BSERPINA5 protein, humanTICAM1 protein, human

Identifiers

PMID27207655
PMCPMC4936384
OpenAlexW2343860642

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.