Evidence map›Paper›PMID 27203426›Full record

ArticlePLoS genetics2016

Antimicrobial Functions of Lactoferrin Promote Genetic Conflicts in Ancient Primates and Modern Humans.

Matthew F Barber, Zev Kronenberg, Mark Yandell, Nels C Elde

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 26 citations in OpenAlex.

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  14. Transition Metals and Virulence in Bacteria.Annual review of genetics · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Matthew F BarberDepartment of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah, United States of America.ORCID 0000-0003-2008-2165
Zev KronenbergDepartment of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah, United States of America.
Mark YandellDepartment of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah, United States of America.
Nels C EldeDepartment of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah, United States of America.
University of Utah · US

Funding

TRAINING PROGRAM IN GENETICST32GM007464 · NIGMS · UNIVERSITY OF UTAH · PI GRUNWALD, DAVID J., STANFIELD, GILLIAN · 1985 to 2020
$6.1M
VAAST+: Tool for variant prioritization, risk assessment and disease-gene findingR01GM104390 · NIGMS · UNIVERSITY OF UTAH · PI JORDE, LYNN, YANDELL, MARK DOUGLAS · 2013 to 2017
$2.2M
Mechanisms of mimicry underlying the evolution of a model poxvirusR01GM114514 · NIGMS · UNIVERSITY OF UTAH · PI ELDE, NELS C. · 2015 to 2019
$1.6M
Adaptive evolution of bacteria in the battle for ironR00GM115822 · NIGMS · UNIVERSITY OF OREGON · PI BARBER, MATTHEW FREDERICK · 2016 to 2018
$746k
Adaptive evolution of bacteria in the battle for ironK99GM115822 · NIGMS · UNIVERSITY OF UTAH · PI BARBER, MATTHEW FREDERICK · 2015 to 2016
$105k
NIGMS NIH HHS K99 GM115822NIGMS NIH HHS R00 GM115822NIGMS NIH HHS R01 GM104390NIGMS NIH HHS R01 GM114514NIGMS NIH HHS T32 GM007464
6 · The paper itself

Abstract

Lactoferrin is a multifunctional mammalian immunity protein that limits microbial growth through sequestration of nutrient iron. Additionally, lactoferrin possesses cationic protein domains that directly bind and inhibit diverse microbes. The implications for these dual functions on lactoferrin evolution and genetic conflicts with microbes remain unclear. Here we show that lactoferrin has been subject to recurrent episodes of positive selection during primate divergence predominately at antimicrobial peptide surfaces consistent with long-term antagonism by bacteria. An abundant lactoferrin polymorphism in human populations and Neanderthals also exhibits signatures of positive selection across primates, linking ancient host-microbe conflicts to modern human genetic variation. Rapidly evolving sites in lactoferrin further correspond to molecular interfaces with opportunistic bacterial pathogens causing meningitis, pneumonia, and sepsis. Because microbes actively target lactoferrin to acquire iron, we propose that the emergence of antimicrobial activity provided a pivotal mechanism of adaptation sparking evolutionary conflicts via acquisition of new protein functions.

Indexed as

Amino Acid SequenceAnimalsAntimicrobial Cationic PeptidesBacteriaGenetics, PopulationHumansIronLactoferrinNeanderthalsPolymorphism, GeneticPrimatesSelection, GeneticAntimicrobial Cationic PeptidesIronLactoferrin

Identifiers

PMID27203426
PMCPMC4874600
OpenAlexW2951745891

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.