Evidence map›Paper›PMID 27203176›Full record

ArticleMolecular cell2016

The Noncanonical Role of ULK/ATG1 in ER-to-Golgi Trafficking Is Essential for Cellular Homeostasis.

Joung Hyuck Joo, Bo Wang, Elisa Frankel, Liang Ge, Lu Xu, Rekha Iyengar, XiuJie Li-Harms, Christopher Wright, Timothy I Shaw, Tullia Lindsten and 7 more

Erratum issuedAbstract read
In one paragraph

Article in Molecular cell, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 97 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
97citing papers in PubMed, 1 pooled it
19.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

97 citing papers in PubMed, 1 synthesis or guideline pooled it, 184 citations in OpenAlex.

  1. Guideline
  2. Review
  3. Article
  4. Article
  5. Article
  6. The role of autophagy in protozoan infections.Frontiers in cellular and infection microbiology · 2026
    Review
  7. The AMPK Pathway: Molecular Rejuvenation of Metabolism and Mitochondria.Annual review of cell and developmental biology · 2025
    Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Physiological functions of ULK1/2.Journal of molecular biology · 2024
    Review
  14. ULK/Atg1: phasing in and out of autophagy.Trends in biochemical sciences · 2024
    Review
  15. Review
  16. Article
  17. Review
  18. Review
  19. Epigenetic regulation ofAutophagy · 2024
    Review
  20. Article

37 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 6 institutions in 1 country.

Joung Hyuck Joo *Department of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Bo Wang *Department of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Elisa FrankelDepartment of Biomolecular Chemistry, University of Wisconsin-Madison Medical School, Madison, WI, USA.
Liang GeDepartment of Molecular and Cellular Biology, University of California Berkeley, Berkeley, CA, USA.
Lu XuDepartment of Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, NY, USA.
Rekha IyengarDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.
XiuJie Li-HarmsDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Christopher WrightDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Timothy I ShawSt. Jude Proteomics Facility, St. Jude Children's Research Hospital, Memphis, TN, USA.
Tullia LindstenImmunology Program, Memorial Sloan Kettering Cancer Center, New York City, NY, USA.
Douglas R GreenDepartment of Immunology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Junmin PengSt. Jude Proteomics Facility, St. Jude Children's Research Hospital, Memphis, TN, USA.
Linda M HendershotDepartment of Tumor Cell Biology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Fusun KilicDepartment of Biochemistry and Molecular Biology, University of Arkansas for Medical Sciences, Little Rock, AR, USA.
Ji Ying SzeDepartment of Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, NY, USA.
Anjon AudhyaDepartment of Biomolecular Chemistry, University of Wisconsin-Madison Medical School, Madison, WI, USA.
Mondira KunduDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.
St. Jude Children's Research Hospital · USAlbert Einstein College of Medicine · USUniversity of Wisconsin–Madison · USMemorial Sloan Kettering Cancer Center · USUniversity of Arkansas for Medical Sciences · USUniversity of California, Berkeley · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
Translational Research CoreP30DK020541 · NIDDK · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI STREAMSON C CHUA · 2015 to 2026
$27.7M
GRADUATE TRAINING IN MOLECULAR BIOSCIENCEST32GM007215 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI HULL, CHRISTINA M · 1985 to 2018
$22.5M
Non-canonical functions of autophagy proteinsR01AI040646 · NIAID · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI GREEN, DOUGLAS R. · 1997 to 2023
$8.6M
Communication between platelet SERT and plasma 5HTR01HL091196 · NHLBI · UNIV OF ARKANSAS FOR MED SCIS · PI KILIC, FUSUN · 2009 to 2014
$2.2M
Regulation of autophagy by AMPK, Hsp90-Cdc37 and Ulk1 in erythroid cellsR01HL114697 · NHLBI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI KUNDU, MONDIRA · 2012 to 2016
$2.2M
Regulatory mechanisms that control vesicle secretion at the endoplasmic reticulumR01GM110567 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI AUDHYA, ANJON · 2015 to 2019
$1.8M
RNA splicing dysfunction in Alzheimer's diseaseR01AG047928 · NIA · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI PENG, JUNMIN · 2015 to 2019
$1.8M
Functional Dissection of Autophagosome BiogenesisK99GM114397 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI GE, LIANG · 2015 to 2016
$173k
Placental serotonin transporter uses ERp44 and Ero1-L for maturation.R03HD058697 · NICHD · UNIV OF ARKANSAS FOR MED SCIS · PI KILIC, FUSUN · 2009 to 2010
$143k
Impact of Diabetes on Placental Serotonin TransporterR03HD053477 · NICHD · UNIV OF ARKANSAS FOR MED SCIS · PI KILIC, FUSUN · 2006 to 2007
$140k
NCI NIH HHS P30 CA008748NCI NIH HHS P30 CA021765NHLBI NIH HHS R01 HL091196NHLBI NIH HHS R01 HL114697NIAID NIH HHS R01 AI040646NIA NIH HHS R01 AG047928NICHD NIH HHS R03 HD053477NICHD NIH HHS R03 HD058697NIDDK NIH HHS P30 DK020541NIGMS NIH HHS K99 GM114397NIGMS NIH HHS R01 GM110567NIGMS NIH HHS T32 GM007215
6 · The paper itself

Abstract

ULK1 and ULK2 are thought to be essential for initiating autophagy, and Ulk1/2-deficient mice die perinatally of autophagy-related defects. Therefore, we used a conditional knockout approach to investigate the roles of ULK1/2 in the brain. Although the mice showed neuronal degeneration, the neurons showed no accumulation of P62(+)/ubiquitin(+) inclusions or abnormal membranous structures, which are observed in mice lacking other autophagy genes. Rather, neuronal death was associated with activation of the unfolded protein response (UPR) pathway. An unbiased proteomics approach identified SEC16A as an ULK1/2 interaction partner. ULK-mediated phosphorylation of SEC16A regulated the assembly of endoplasmic reticulum (ER) exit sites and ER-to-Golgi trafficking of specific cargo, and did not require other autophagy proteins (e.g., ATG13). The defect in ER-to-Golgi trafficking activated the UPR pathway in ULK-deficient cells; both processes were reversed upon expression of SEC16A with a phosphomimetic substitution. Thus, the regulation of ER-to-Golgi trafficking by ULK1/2 is essential for cellular homeostasis.

Indexed as

AnimalsAutophagyAutophagy-Related Protein-1 HomologAutophagy-Related Protein 7BrainCaenorhabditis elegansCaenorhabditis elegans ProteinsCarrier ProteinsCOP-Coated VesiclesEndoplasmic ReticulumFemaleFibroblastsGenotypeGolgi ApparatusHEK293 CellsHomeostasisAtg7 protein, mouseAutophagy-Related Protein-1 HomologAutophagy-Related Protein 7Caenorhabditis elegans ProteinsCarrier ProteinsNuclear ProteinsProtein Serine-Threonine KinasesSec13 protein, mouseSec16a protein, mouseSec23a protein, mousesec-23 protein, C elegansUlk1 protein, mouseUlk2 protein, mouseVesicular Transport Proteins

Identifiers

PMID27203176
PMCPMC4993601
OpenAlexW2398577671

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.