Evidence map›Paper›PMID 27197267›Full record

ArticleCancer research2016

The BRCA1-Δ11q Alternative Splice Isoform Bypasses Germline Mutations and Promotes Therapeutic Resistance to PARP Inhibition and Cisplatin.

Yifan Wang, Andrea J Bernhardy, Cristina Cruz, John J Krais, Joseph Nacson, Emmanuelle Nicolas, Suraj Peri, Hanneke van der Gulden, Ingrid van der Heijden, Shane W O'Brien and 29 more

Open access · greenAbstract read
In one paragraph

Article in Cancer research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 182 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
182citing papers in PubMed, 1 pooled it
10.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

182 citing papers in PubMed, 1 synthesis or guideline pooled it, 267 citations in OpenAlex.

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122 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

39 authors at 20 institutions in 11 countries.

Yifan WangMolecular Therapeutics Program, Fox Chase Cancer Center, Philadelphia, Pennsylvania.
Andrea J BernhardyMolecular Therapeutics Program, Fox Chase Cancer Center, Philadelphia, Pennsylvania.
Cristina CruzHigh Risk and Cancer Prevention Group, Vall d'Hebron Institute of Oncology, Barcelona, Spain. Experimental Therapeutics Group, Vall d'Hebron Institute of Oncology, Barcelona, Spain.
John J KraisMolecular Therapeutics Program, Fox Chase Cancer Center, Philadelphia, Pennsylvania.
Joseph NacsonMolecular Therapeutics Program, Fox Chase Cancer Center, Philadelphia, Pennsylvania.
Emmanuelle NicolasCancer Biology Program, Fox Chase Cancer Center, Philadelphia, Pennsylvania.
Suraj PeriMolecular Therapeutics Program, Fox Chase Cancer Center, Philadelphia, Pennsylvania.
Hanneke van der GuldenDivision of Pathology, The Netherlands Cancer Institute, Amsterdam, the Netherlands.
Ingrid van der HeijdenDivision of Pathology, The Netherlands Cancer Institute, Amsterdam, the Netherlands.
Shane W O'BrienMolecular Therapeutics Program, Fox Chase Cancer Center, Philadelphia, Pennsylvania.
Yong ZhangImmune Cell Development and Host Defense Program, Fox Chase Cancer Center, Philadelphia, Pennsylvania.
Maribel I HarrellDepartment of Obstetrics and Gynecology and Medicine, University of Washington, Seattle, Washington.
Shawn F JohnsonDepartment of Medical Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, Massachusetts.
Francisco J Candido Dos ReisDepartment of Gynecology and Obstetrics, Ribeirao Preto Medical School, University of Sao Paulo, Sao Paulo, Brazil. Centre for Cancer Genetic Epidemiology, University of Cambridge, Cambridge, United Kingdom.
Paul D P PharoahCentre for Cancer Genetic Epidemiology, University of Cambridge, Cambridge, United Kingdom.
Beth KarlanWomen's Cancer Program at the Samuel Oschin Comprehensive Cancer Institute, Cedars-Sinai Medical Center, Los Angeles, California.
Charlie GourleyUniversity of Edinburgh Cancer Research UK Centre, MRC IGMM, Edinburgh, United Kingdom.
Diether LambrechtsVIB Vesalius Research Center, University of Leuven, Leuven, Belgium.
Georgia Chenevix-TrenchQIMR Berghofer Medical Research Institute, Herston, Australia.
Håkan OlssonDepartments of Cancer Epidemiology and Oncology, Lund University, Lund, Sweden.
Javier J BenitezHuman Genetics Group and Human Genotyping Unit Spanish National Cancer Research Centre (CNIO), Madrid, Spain.
Mark H GreeneDivision of Cancer Epidemiology and Genetics, National Cancer Institute, Rockville, Maryland.
Martin GoreRoyal Marsden NHS Foundation Trust, London, United Kingdom.
Robert NussbaumUniversity of California San Francisco, Cancer Risk Program, San Francisco, California.
Siegal SadetzkiGertner Institute for Epidemiology and Health Policy Research, Sheba Medical Center, Tel Hashomer, Israel.
Simon A GaytherDepartment of Preventive Medicine, Keck School of Medicine, University of Southern California Norris Comprehensive Cancer Center, Los Angeles, California.
Susanne K KjaerDepartment of Virus, Lifestyle and Genes, Danish Cancer Society Research Center, Copenhagen, Denmark.
kConFab Investigators
Alan D D'AndreaDepartment of Radiation Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, Massachusetts. Department of Pediatrics, Children's Hospital and Harvard Medical School, Boston, Massachusetts.
Geoffrey I ShapiroDepartment of Medical Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, Massachusetts. Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts.
David L WiestImmune Cell Development and Host Defense Program, Fox Chase Cancer Center, Philadelphia, Pennsylvania.
Denise C ConnollyMolecular Therapeutics Program, Fox Chase Cancer Center, Philadelphia, Pennsylvania.
Mary B DalyRisk Assessment Program, Fox Chase Cancer Center, Philadelphia, Pennsylvania.
Elizabeth M SwisherDepartment of Obstetrics and Gynecology and Medicine, University of Washington, Seattle, Washington.
Peter BouwmanDivision of Pathology, The Netherlands Cancer Institute, Amsterdam, the Netherlands.
Jos JonkersDivision of Pathology, The Netherlands Cancer Institute, Amsterdam, the Netherlands.
Judith BalmañaHigh Risk and Cancer Prevention Group, Vall d'Hebron Institute of Oncology, Barcelona, Spain.
Violeta SerraExperimental Therapeutics Group, Vall d'Hebron Institute of Oncology, Barcelona, Spain.
Neil JohnsonMolecular Therapeutics Program, Fox Chase Cancer Center, Philadelphia, Pennsylvania. neil.johnson@fccc.edu.
Fox Chase Cancer Center · USDutch Cancer Society · NLBrigham and Women's Hospital · USUniversity of Washington · USVall d'Hebron Institut de Recerca · ESBoston Children's Hospital · USCancer Research Institute · USCancer Research UK Cambridge Center · GBCedars-Sinai Medical Center · USDana-Farber Cancer Institute · USDanish Cancer Society · DKEdinburgh Cancer Research · GBLund University · SENational Cancer Institute · UAQIMR Berghofer Medical Research Institute · AURoyal Marsden NHS Foundation Trust · GBSheba Medical Center · ILSpanish National Cancer Research Centre · ESUniversidade de São Paulo · BRUniversity of Southern California · US

Funding

WORD PROCESSING CENTER--COREP30CA006927 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI Margaret von Mehren · 1985 to 2026
$138.8M
Vaccinating against IGFBP-2 to prevent ovarian cancer relapseP50CA083636 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI DRESCHER, CHARLES, URBAN, NICOLE DENISE · 1999 to 2015
$35.1M
Therapeutic Micro RNA Strategies for Ovarian CancerP50CA083638 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI GODWIN, ANDREW K., GOLEMIS, ERICA A. · 1999 to 2013
$33.6M
TRAINING PROGRAM IN CANCER RESEARCHT32CA009035 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI CHERNOFF, JONATHAN · 1985 to 2020
$10.5M
Identifying BRCA1 protein variants that provide resistance to therapyR21CA191690 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI JOHNSON, NEIL · 2015 to 2016
$427k
Cancer Research UK 10119Cancer Research UK 10124NCI NIH HHS P30 CA006927NCI NIH HHS P50 CA083636NCI NIH HHS P50 CA083638NCI NIH HHS R21 CA191690NCI NIH HHS T32 CA009035
6 · The paper itself

Abstract

Breast and ovarian cancer patients harboring BRCA1/2 germline mutations have clinically benefitted from therapy with PARP inhibitor (PARPi) or platinum compounds, but acquired resistance limits clinical impact. In this study, we investigated the impact of mutations on BRCA1 isoform expression and therapeutic response. Cancer cell lines and tumors harboring mutations in exon 11 of BRCA1 express a BRCA1-Δ11q splice variant lacking the majority of exon 11. The introduction of frameshift mutations to exon 11 resulted in nonsense-mediated mRNA decay of full-length, but not the BRCA1-Δ11q isoform. CRISPR/Cas9 gene editing as well as overexpression experiments revealed that the BRCA1-Δ11q protein was capable of promoting partial PARPi and cisplatin resistance relative to full-length BRCA1, both in vitro and in vivo Furthermore, spliceosome inhibitors reduced BRCA1-Δ11q levels and sensitized cells carrying exon 11 mutations to PARPi treatment. Taken together, our results provided evidence that cancer cells employ a strategy to remove deleterious germline BRCA1 mutations through alternative mRNA splicing, giving rise to isoforms that retain residual activity and contribute to therapeutic resistance. Cancer Res; 76(9); 2778-90. ©2016 AACR.

Indexed as

Alternative SplicingAnimalsBlotting, WesternBRCA1 ProteinBreast NeoplasmsCisplatinDrug Resistance, NeoplasmFemaleFluorescent Antibody TechniqueGerm-Line MutationHumansImmunohistochemistryMiceOvarian NeoplasmsPoly(ADP-ribose) Polymerase InhibitorsPolymerase Chain ReactionBRCA1 ProteinBRCA1 protein, humanCisplatinPoly(ADP-ribose) Polymerase InhibitorsProtein Isoforms

Identifiers

PMID27197267
PMCPMC4874568
OpenAlexW2343436177

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.