Evidence map›Paper›PMID 27196677›Full record

ArticleScientific reports2016

Legionella pneumophila strain associated with the first evidence of person-to-person transmission of Legionnaires' disease: a unique mosaic genetic backbone.

Vítor Borges, Alexandra Nunes, Daniel A Sampaio, Luís Vieira, Jorge Machado, Maria J Simões, Paulo Gonçalves, João P Gomes

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed, 1 pooled it
6.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 1 synthesis or guideline pooled it, 56 citations in OpenAlex.

  1. Pooled it
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  5. A community Legionnaires' disease outbreak linked to a collective biomass condensing boiler, France, 2019.Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2025
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  9. The Presence ofMicroorganisms · 2023
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  10. Development of heat-shock resistance inApplied and environmental microbiology · 2023
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  11. Review
  12. Article
  13. Journal of clinical medicine · 2022
    Review
  14. Review
  15. Article
  16. A Search for NovelFrontiers in cellular and infection microbiology · 2022
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  17. Review
  18. The Role of Lipids inInternational journal of molecular sciences · 2021
    Review
  19. Lung abscess due to Neisseria meningitidis serogroup X-unexpected virulence of a commensal resulting from putative serogroup B capsular switching.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Vítor BorgesBioinformatics Unit and Research Unit, National Institute of Health, Lisbon, Portugal.
Alexandra NunesBioinformatics Unit and Research Unit, National Institute of Health, Lisbon, Portugal.
Daniel A SampaioInnovation and Technology Unit, National Institute of Health, Lisbon, Portugal.
Luís VieiraInnovation and Technology Unit, National Institute of Health, Lisbon, Portugal.
Jorge MachadoCoordination of the Department of Infectious Diseases, National Institute of Health, Lisbon, Portugal.
Maria J SimõesNational Reference Laboratory for Legionella, National Institute of Health, Lisbon, Portugal.
Paulo GonçalvesNational Reference Laboratory for Legionella, National Institute of Health, Lisbon, Portugal.
João P GomesBioinformatics Unit and Research Unit, National Institute of Health, Lisbon, Portugal.
National Institute of Health Dr. Ricardo Jorge · PT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A first strong evidence of person-to-person transmission of Legionnaires' Disease (LD) was recently reported. Here, we characterize the genetic backbone of this case-related Legionella pneumophila strain ("PtVFX/2014"), which also caused a large outbreak of LD. PtVFX/2014 is phylogenetically divergent from the most worldwide studied outbreak-associated L. pneumophila subspecies pneumophila serogroup 1 strains. In fact, this strain is also from serogroup 1, but belongs to the L. pneumophila subspecies fraseri. Its genomic mosaic backbone reveals eight horizontally transferred regions encompassing genes, for instance, involved in lipopolysaccharide biosynthesis or encoding virulence-associated Dot/Icm type IVB secretion system (T4BSS) substrates. PtVFX/2014 also inherited a rare ~65 kb pathogenicity island carrying virulence factors and detoxifying enzymes believed to contribute to the emergence of best-fitted strains in water reservoirs and in human macrophages, as well as a inter-species transferred (from L. oakridgensis) ~37.5 kb genomic island (harboring a lvh/lvr T4ASS cluster) that had never been found intact within L. pneumophila species. PtVFX/2014 encodes another lvh/lvr cluster near to CRISPR-associated genes, which may boost L. pneumophila transition from an environmental bacterium to a human pathogen. Overall, this unique genomic make-up may impact PtVFX/2014 ability to adapt to diverse environments, and, ultimately, to be transmitted and cause human disease.

Indexed as

Genome, BacterialGenomic IslandsHumansLegionella pneumophilaLegionnaires' DiseasePhylogenyPortugalSerogroupVirulence FactorsWhole Genome SequencingVirulence Factors

Identifiers

PMID27196677
PMCPMC4872527
OpenAlexW2402545685

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.