Evidence map›Paper›PMID 27196608›Full record

ArticlePloS one2016

Variable Nitrogen Fixation in Wild Populus.

Sharon L Doty, Andrew W Sher, Neil D Fleck, Mahsa Khorasani, Roger E Bumgarner, Zareen Khan, Andrew W K Ko, Soo-Hyung Kim, Thomas H DeLuca

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
15.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 84 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Potential Biocontrol Activities ofPathogens (Basel, Switzerland) · 2022
    Article
  11. Unraveling Nitrogen Fixing Potential of Endophytic Diazotrophs of DifferentInternational journal of molecular sciences · 2022
    Article
  12. Article
  13. Review
  14. Review
  15. A SimpleFrontiers in microbiology · 2021
    Article
  16. Hyunsoonleella sp. HU1-3 Increased the Biomass ofFrontiers in microbiology · 2021
    Article
  17. Article
  18. Endophyte-Promoted Phosphorus Solubilization inFrontiers in plant science · 2020
    Article
  19. Article
  20. The Effect of Microbial Endophyte Consortia onFrontiers in microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Sharon L DotySchool of Environmental and Forest Sciences, College of the Environment, University of Washington, Seattle, Washington, United States of America.
Andrew W SherSchool of Environmental and Forest Sciences, College of the Environment, University of Washington, Seattle, Washington, United States of America.
Neil D FleckSchool of Environmental and Forest Sciences, College of the Environment, University of Washington, Seattle, Washington, United States of America.
Mahsa KhorasaniSchool of Environmental and Forest Sciences, College of the Environment, University of Washington, Seattle, Washington, United States of America.
Roger E BumgarnerDepartment of Microbiology, University of Washington, Seattle, Washington, United States of America.
Zareen KhanSchool of Environmental and Forest Sciences, College of the Environment, University of Washington, Seattle, Washington, United States of America.
Andrew W K KoSchool of Environmental and Forest Sciences, College of the Environment, University of Washington, Seattle, Washington, United States of America.
Soo-Hyung KimSchool of Environmental and Forest Sciences, College of the Environment, University of Washington, Seattle, Washington, United States of America.
Thomas H DeLucaSchool of Environmental and Forest Sciences, College of the Environment, University of Washington, Seattle, Washington, United States of America.
University of Washington · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The microbiome of plants is diverse, and like that of animals, is important for overall health and nutrient acquisition. In legumes and actinorhizal plants, a portion of essential nitrogen (N) is obtained through symbiosis with nodule-inhabiting, N2-fixing microorganisms. However, a variety of non-nodulating plant species can also thrive in natural, low-N settings. Some of these species may rely on endophytes, microorganisms that live within plants, to fix N2 gas into usable forms. Here we report the first direct evidence of N2 fixation in the early successional wild tree, Populus trichocarpa, a non-leguminous tree, from its native riparian habitat. In order to measure N2 fixation, surface-sterilized cuttings of wild poplar were assayed using both 15N2 incorporation and the commonly used acetylene reduction assay. The 15N label was incorporated at high levels in a subset of cuttings, suggesting a high level of N-fixation. Similarly, acetylene was reduced to ethylene in some samples. The microbiota of the cuttings was highly variable, both in numbers of cultured bacteria and in genetic diversity. Our results indicated that associative N2-fixation occurred within wild poplar and that a non-uniformity in the distribution of endophytic bacteria may explain the variability in N-fixation activity. These results point to the need for molecular studies to decipher the required microbial consortia and conditions for effective endophytic N2-fixation in trees.

Indexed as

MicrobiotaNitrogen FixationPopulus

Identifiers

PMID27196608
PMCPMC4873266
OpenAlexW2408299904

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.