Evidence map›Paper›PMID 27196317›Full record

ArticlePloS one2016

Gene Expression Analysis Indicates Divergent Mechanisms in DEN-Induced Carcinogenesis in Wild Type and Bid-Deficient Livers.

Changshun Yu, Shengmin Yan, Bilon Khambu, Xiaoyun Chen, Zheng Dong, Jianhua Luo, George K Michalopoulos, Shangwei Wu, Xiao-Ming Yin

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Changshun YuDivision of Clinical Microbiology, School of Laboratory Medicine, Tianjin Medical University, Tianjin, China.
Shengmin YanDepartment of Pathology and Laboratory Medicine, Indiana University School of Medicine, Indianapolis, Indiana, United States of America.
Bilon KhambuDepartment of Pathology and Laboratory Medicine, Indiana University School of Medicine, Indianapolis, Indiana, United States of America.
Xiaoyun ChenDepartment of Pathology and Laboratory Medicine, Indiana University School of Medicine, Indianapolis, Indiana, United States of America.
Zheng DongDepartment of Cellular Biology and Anatomy, Medical College of Georgia and Charlie Norwood VA Medical Center, Augusta, Georgia, United States of America.
Jianhua LuoDepartment of Pathology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, United States of America.
George K MichalopoulosDepartment of Pathology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, United States of America.
Shangwei WuDivision of Clinical Microbiology, School of Laboratory Medicine, Tianjin Medical University, Tianjin, China.
Xiao-Ming YinDepartment of Pathology and Laboratory Medicine, Indiana University School of Medicine, Indianapolis, Indiana, United States of America.
Indiana University – Purdue University Indianapolis · USKingmed Diagnostics · CNUniversity of Pittsburgh · USCharlie Norwood VA Medical Center · US

Funding

The impact of growth modulation of liver carcinogenesisR01CA111456 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI YIN, XIAO-MING · 2005 to 2009
$1.4M
Mechanism and role of selective autophagy in ethanol-induced liver injuryR21AA021450 · NIAAA · INDIANA UNIVERSITY INDIANAPOLIS · PI YIN, XIAO-MING · 2014 to 2015
$332k
NCI NIH HHS R01 CA111456NIAAA NIH HHS R21 AA021450
6 · The paper itself

Abstract

Bid is a Bcl-2 family protein. In addition to its pro-apoptosis function, Bid can also promote cell proliferation, maintain S phase checkpoint, and facilitate inflammasome activation. Bid plays important roles in tissue injury and regeneration, hematopoietic homeostasis, and tumorigenesis. Bid participates in hepatic carcinogenesis but the mechanism is not fully understood. Deletion of Bid resulted in diminished tumor burden and delayed tumor progression in a liver cancer model. In order to better understand the Bid-regulated events during hepatic carcinogenesis we performed gene expression analysis in wild type and bid-deficient mice treated with a hepatic carcinogen, diethylnitrosamine. We found that deletion of Bid caused significantly fewer alterations in gene expression in terms of the number of genes affected and the number of pathways affected. In addition, the expression profiles were remarkably different. In the wild type mice, there was a significant increase in the expression of growth regulation-related and immune/inflammation response-related genes, and a significant decrease in the expression of metabolism-related genes, both of which were diminished in bid-deficient livers. These data suggest that Bid could promote hepatic carcinogenesis via growth control and inflammation-mediated events.

Indexed as

Gene Expression Regulation, NeoplasticAnimalsBH3 Interacting Domain Death Agonist ProteinCarcinogenesisCarcinoma, HepatocellularCell ProliferationDiethylnitrosamineFemaleGene DeletionGene Expression ProfilingInflammationLiverLiver NeoplasmsMaleMiceMice, Inbred C57BLBH3 Interacting Domain Death Agonist ProteinBid protein, mouseDiethylnitrosamine

Identifiers

PMID27196317
PMCPMC4873180
OpenAlexW2407859907

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.