Evidence map›Paper›PMID 27195754›Full record

ArticlePLoS genetics2016

Ubr3, a Novel Modulator of Hh Signaling Affects the Degradation of Costal-2 and Kif7 through Poly-ubiquitination.

Tongchao Li, Junkai Fan, Bernardo Blanco-Sánchez, Nikolaos Giagtzoglou, Guang Lin, Shinya Yamamoto, Manish Jaiswal, Kuchuan Chen, Jie Zhang, Wei Wei and 5 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Multifaceted Functions of Rab23 on Primary Cilium-Mediated and Hedgehog Signaling-Mediated Cerebellar Granule Cell Proliferation.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2021
    Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Proteostasis in the Hedgehog signaling pathway.Seminars in cell & developmental biology · 2019
    Review
  12. Article
  13. Article
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 1 country.

Tongchao LiProgram in Developmental Biology, Baylor College of Medicine, Houston, Texas, United States of America.
Junkai FanMarkey Cancer Center and Department of Molecular and Cellular Biochemistry, University of Kentucky, Lexington, Kentucky, United States of America.
Bernardo Blanco-SánchezInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States of America.
Nikolaos GiagtzoglouDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.
Guang LinDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.
Shinya YamamotoProgram in Developmental Biology, Baylor College of Medicine, Houston, Texas, United States of America.ORCID 0000-0003-2172-8036
Manish JaiswalDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.
Kuchuan ChenProgram in Developmental Biology, Baylor College of Medicine, Houston, Texas, United States of America.
Jie ZhangMarkey Cancer Center and Department of Molecular and Cellular Biochemistry, University of Kentucky, Lexington, Kentucky, United States of America.
Wei WeiDepartment of Molecular and Cellular Biology, Baylor College of Medicine, Houston, Texas, United States of America.
Michael T LewisProgram in Developmental Biology, Baylor College of Medicine, Houston, Texas, United States of America.
Andrew K GrovesProgram in Developmental Biology, Baylor College of Medicine, Houston, Texas, United States of America.
Monte WesterfieldInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States of America.
Jianhang JiaMarkey Cancer Center and Department of Molecular and Cellular Biochemistry, University of Kentucky, Lexington, Kentucky, United States of America.
Hugo J BellenProgram in Developmental Biology, Baylor College of Medicine, Houston, Texas, United States of America.
Baylor College of Medicine · USUniversity of Kentucky · USHoward Hughes Medical Institute · USUniversity of Oregon · US

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI DAVID R ROWLEY · 2007 to 2026
$73.9M
Zebrafish FacilityP01HD022486 · NICHD · UNIVERSITY OF OREGON · PI EISEN, JUDITH S · 1987 to 2017
$28.8M
The Core of the Computational BiologyU54CA149196 · NCI · METHODIST HOSPITAL RESEARCH INSTITUTE · PI WONG, STEPHEN TC · 2010 to 2015
$10.6M
Steps towards a paternal gene activation therapy for Angelman syndromeU54HD083092 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI NELSON, DAVID LOREN, SAMACO, RODNEY C · 2014 to 2019
$7.8M
GENETIC REGULATION OF INNER EAR FORMATIONR01DC004186 · NIDCD · UNIVERSITY OF OREGON · PI WESTERFIELD, MONTE · 1999 to 2013
$5.5M
The Regulation of Smoothened in Hedgehog SignalingR01GM079684 · NIGMS · UNIVERSITY OF TEXAS MED BR GALVESTON · PI JIA, JIANHANG · 2008 to 2018
$3.0M
Mapping and rescuing EMS-induced lethal mutations on the Drosophila X ChromosomeRC4GM096355 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI BELLEN, HUGO J · 2010 to 2010
$1.7M
Using Drosophila to identify human deafness genesR21DC010987 · NIDCD · BAYLOR COLLEGE OF MEDICINE · PI GROVES, ANDREW K · 2010 to 2011
$378k
Howard Hughes Medical InstituteNCI NIH HHS P30 CA125123NCI NIH HHS U54 CA149196NICHD NIH HHS P01 HD022486NICHD NIH HHS U54 HD083092NIDCD NIH HHS R01 DC004186NIDCD NIH HHS R21 DC010987NIGMS NIH HHS R01 GM079684NIGMS NIH HHS RC4 GM096355
6 · The paper itself

Abstract

Hedgehog (Hh) signaling regulates multiple aspects of metazoan development and tissue homeostasis, and is constitutively active in numerous cancers. We identified Ubr3, an E3 ubiquitin ligase, as a novel, positive regulator of Hh signaling in Drosophila and vertebrates. Hh signaling regulates the Ubr3-mediated poly-ubiquitination and degradation of Cos2, a central component of Hh signaling. In developing Drosophila eye discs, loss of ubr3 leads to a delayed differentiation of photoreceptors and a reduction in Hh signaling. In zebrafish, loss of Ubr3 causes a decrease in Shh signaling in the developing eyes, somites, and sensory neurons. However, not all tissues that require Hh signaling are affected in zebrafish. Mouse UBR3 poly-ubiquitinates Kif7, the mammalian homologue of Cos2. Finally, loss of UBR3 up-regulates Kif7 protein levels and decreases Hh signaling in cultured cells. In summary, our work identifies Ubr3 as a novel, evolutionarily conserved modulator of Hh signaling that boosts Hh in some tissues.

Indexed as

AnimalsDrosophila melanogasterDrosophila ProteinsEyeHedgehog ProteinsKinesinsMicePhotoreceptor CellsPolyubiquitinProteolysisRNA, Small InterferingSignal TransductionUbiquitinationUbiquitin-Protein LigasesZebrafishcos protein, DrosophilaDrosophila ProteinsHedgehog ProteinsKif7 protein, mouseKinesinsPolyubiquitinRNA, Small InterferingUbiquitin-Protein LigasesUBR3 protein, mouse

Identifiers

PMID27195754
PMCPMC4873228
OpenAlexW2405103990

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.