Evidence map›Paper›PMID 27195301›Full record

ArticleJournal of diabetes research2016

Collagen V Is a Potential Substrate for Clostridial Collagenase G in Pancreatic Islet Isolation.

Hiroki Shima, Akiko Inagaki, Takehiro Imura, Youhei Yamagata, Kimiko Watanabe, Kazuhiko Igarashi, Masafumi Goto, Kazutaka Murayama

Open access · goldAbstract read
In one paragraph

Article in Journal of diabetes research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.4field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Hiroki ShimaDepartment of Biochemistry, Tohoku University Graduate School of Medicine, Sendai 980-8575, Japan; AMED-CREST, Japan Agency for Medical Research and Development, Tokyo 100-0004, Japan.
Akiko InagakiDivision of Transplantation and Regenerative Medicine, Tohoku University School of Medicine, Sendai 980-8575, Japan.
Takehiro ImuraDivision of Transplantation and Regenerative Medicine, Tohoku University School of Medicine, Sendai 980-8575, Japan; New Industry Creation Hatchery Center, Tohoku University, Sendai 980-8579, Japan.
Youhei YamagataGraduate School of Agricultural Science, Tokyo University of Agriculture and Technology, Fuchu 183-8509, Japan.
Kimiko WatanabeNew Industry Creation Hatchery Center, Tohoku University, Sendai 980-8579, Japan.
Kazuhiko IgarashiDepartment of Biochemistry, Tohoku University Graduate School of Medicine, Sendai 980-8575, Japan; AMED-CREST, Japan Agency for Medical Research and Development, Tokyo 100-0004, Japan; Center for Regulatory Epigenome and Diseases, Tohoku University Graduate School of Medicine, Sendai 980-8575, Japan.
Masafumi GotoDivision of Transplantation and Regenerative Medicine, Tohoku University School of Medicine, Sendai 980-8575, Japan.
Kazutaka MurayamaGraduate School of Biomedical Engineering, Tohoku University, Sendai 980-8575, Japan.
Tohoku University · JPTokyo University of Agriculture and Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The clostridial collagenases, H and G, play key roles in pancreatic islet isolation. Collagenases digest the peptide bond between Yaa and the subsequent Gly in Gly-Xaa-Yaa repeats. To fully understand the pancreatic islet isolation process, identification of the collagenase substrates in the tissue is very important. Although collagen types I and III were reported as possible substrates for collagenase H, the substrate for collagenase G remains unknown. In this study, collagen type V was focused upon as the target for collagenases. In vitro digestion experiments for collagen type V were performed and analyzed by SDS-PAGE and mass spectrometry. Porcine pancreatic tissues were digested in vitro under three conditions and observed during digestion. The results revealed that collagen type V was only digested by collagenase G and that the digestion was initiated from the N-terminal part. Tissue degradation during porcine islet isolation was only observed in the presence of both collagenases H and G. These findings suggest that collagen type V is one of the substrates for collagenase G. The enzymatic activity of collagenase G appears to be more important for pancreatic islet isolation in large mammals such as pigs and humans.

Indexed as

AnimalsBacterial ProteinsClostridiumCollagenasesCollagen Type VElectrophoresis, Polyacrylamide GelIn Vitro TechniquesIslets of LangerhansIslets of Langerhans TransplantationMass SpectrometryMicrobial CollagenaseSwineBacterial ProteinsColH protein, Clostridium histolyticumCollagenasesCollagen Type VMicrobial Collagenase

Identifiers

PMID27195301
PMCPMC4852369
OpenAlexW2340385567

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.