Evidence map›Paper›PMID 27194953›Full record

ArticleArchaea (Vancouver, B.C.)2016

Discovery and Characterization of Iron Sulfide and Polyphosphate Bodies Coexisting in Archaeoglobus fulgidus Cells.

Daniel B Toso, Muhammad Mohsin Javed, Elizabeth Czornyj, Robert P Gunsalus, Z Hong Zhou

Open access · hybridAbstract read
In one paragraph

Article in Archaea (Vancouver, B.C.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. The Protein Scaffolding Functions of Polyphosphate.Journal of molecular biology · 2024
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Marine ArchaeonFrontiers in microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Daniel B TosoDepartment of Microbiology, Immunology, and Molecular Genetics, UCLA, Los Angeles, CA 90095, USA; Electron Imaging Center for Nanomachines, California NanoSystems Institute, UCLA, Los Angeles, CA 90095, USA; The UCLA Biomedical Engineering Interdepartmental Program, UCLA, Los Angeles, CA 09905, USA.
Muhammad Mohsin JavedDepartment of Microbiology, Immunology, and Molecular Genetics, UCLA, Los Angeles, CA 90095, USA; Institute of Industrial Biotechnology, GC University, Lahore 54000, Pakistan.
Elizabeth CzornyjDepartment of Microbiology, Immunology, and Molecular Genetics, UCLA, Los Angeles, CA 90095, USA.
Robert P GunsalusDepartment of Microbiology, Immunology, and Molecular Genetics, UCLA, Los Angeles, CA 90095, USA; The UCLA-DOE Institute of Genomics and Proteomics, UCLA, Los Angeles, CA 90095, USA.ORCID 0000-0002-1937-8412
Z Hong ZhouDepartment of Microbiology, Immunology, and Molecular Genetics, UCLA, Los Angeles, CA 90095, USA; Electron Imaging Center for Nanomachines, California NanoSystems Institute, UCLA, Los Angeles, CA 90095, USA; The UCLA Biomedical Engineering Interdepartmental Program, UCLA, Los Angeles, CA 09905, USA.
University of California, Los Angeles · USCalifornia NanoSystems Institute · US

Funding

High-Resolution CryoEM Reconstruction of Large ComplexesR01GM071940 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI ZHOU, Z HONG · 2006 to 2025
$5.0M
HIGH-END CRYOEM INSTRUMENT FOR UCLA ELECTRON IMAGING CTR FOR NANOMACHINES: AIDSS10RR023057 · NCRR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ZHOU, Z HONG · 2006 to 2006
$1.6M
NCRR NIH HHS 1S10RR23057NCRR NIH HHS S10 RR023057NIGMS NIH HHS GM071940NIGMS NIH HHS R01 GM071940
6 · The paper itself

Abstract

Inorganic storage granules have long been recognized in bacterial and eukaryotic cells but were only recently identified in archaeal cells. Here, we report the cellular organization and chemical compositions of storage granules in the Euryarchaeon, Archaeoglobus fulgidus strain VC16, a hyperthermophilic, anaerobic, and sulfate-reducing microorganism. Dense granules were apparent in A. fulgidus cells imaged by cryo electron microscopy (cryoEM) but not so by negative stain electron microscopy. Cryo electron tomography (cryoET) revealed that each cell contains one to several dense granules located near the cell membrane. Energy dispersive X-ray (EDX) spectroscopy and scanning transmission electron microscopy (STEM) show that, surprisingly, each cell contains not just one but often two types of granules with different elemental compositions. One type, named iron sulfide body (ISB), is composed mainly of the elements iron and sulfur plus copper; and the other one, called polyphosphate body (PPB), is composed of phosphorus and oxygen plus magnesium, calcium, and aluminum. PPBs are likely used for energy storage and/or metal sequestration/detoxification. ISBs could result from the reduction of sulfate to sulfide via anaerobic energy harvesting pathways and may be associated with energy and/or metal storage or detoxification. The exceptional ability of these archaeal cells to sequester different elements may have novel bioengineering applications.

Indexed as

AerobiosisAnaerobiosisArchaeoglobus fulgidusCryoelectron MicroscopyCytoplasmic GranulesElectron Microscope TomographyIron CompoundsMicroscopy, Electron, ScanningMicroscopy, Electron, TransmissionPolyphosphatesSpectrometry, X-Ray EmissionSulfidesIron CompoundsPolyphosphatesSulfides

Identifiers

PMID27194953
PMCPMC4853940
OpenAlexW2341737336

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.