Evidence map›Paper›PMID 27194800›Full record

ArticleG3 (Bethesda, Md.)2016

Fruiting Body Formation in Volvariella volvacea Can Occur Independently of Its MAT-A-Controlled Bipolar Mating System, Enabling Homothallic and Heterothallic Life Cycles.

Bingzhi Chen, Arend F van Peer, Junjie Yan, Xiao Li, Bin Xie, Juan Miao, Qianhui Huang, Lei Zhang, Wei Wang, Junsheng Fu and 9 more

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. The Pacific Tree-Parasitic FungusJournal of fungi (Basel, Switzerland) · 2021
    Article
  6. Article
  7. Comparative Proteomic Analysis ofInternational journal of molecular sciences · 2019
    Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Bingzhi ChenMycological Research Center, Fujian Agriculture and Forestry University, Fuzhou 350002, China.ORCID 0000-0003-0254-7475
Arend F van PeerMycological Research Center, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Junjie YanMycological Research Center, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Xiao LiMycological Research Center, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Bin XieMycological Research Center, Fujian Agriculture and Forestry University, Fuzhou 350002, China.ORCID 0000-0003-2192-4168
Juan MiaoMycological Research Center, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Qianhui HuangMycological Research Center, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Lei ZhangMycological Research Center, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Wei WangMycological Research Center, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Junsheng FuMycological Research Center, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Xiang ZhangMycological Research Center, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Xiaoyin ZhangMycological Research Center, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Fengli HuMycological Research Center, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Qingfang KongMycological Research Center, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Xianyun SunInstitute of Microbiology, State Key Laboratory of Mycology, Chinese Academy of Sciences, Beijing 100080, China.
Feng ZouMycological Research Center, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Hanxing ZhangInstitute of Microbiology, State Key Laboratory of Mycology, Chinese Academy of Sciences, Beijing 100080, China.
Shaojie LiInstitute of Microbiology, State Key Laboratory of Mycology, Chinese Academy of Sciences, Beijing 100080, China Lisj@im.ac.cn mrcfafu@163.com.
Baogui XieMycological Research Center, Fujian Agriculture and Forestry University, Fuzhou 350002, China Lisj@im.ac.cn mrcfafu@163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Volvariella volvacea is an important crop in Southeast Asia, but erratic fruiting presents a serious challenge for its production and breeding. Efforts to explain inconsistent fruiting have been complicated by the multinucleate nature, typical lack of clamp connections, and an incompletely identified sexual reproductive system. In this study, we addressed the life cycle of V. volvacea using whole genome sequencing, cloning of MAT loci, karyotyping of spores, and fruiting assays. Microscopy analysis of spores had previously indicated the possible coexistence of heterothallic and homothallic life cycles. Our analysis of the MAT loci showed that only MAT-A, and not MAT-B, controlled heterokaryotization. Thus, the heterothallic life cycle was bipolar. Karyotyping of single spore isolates (SSIs) using molecular markers supported the existence of heterokaryotic spores. However, most SSIs were clearly not heterokaryotic, yet contained structural variation (SV) markers relating to both alleles of both parents. Heterokaryons from crossed, self-sterile homokaryons could produce fruiting bodies, agreeing with bipolar heterothallism. Meanwhile, some SSIs with two different MAT-A loci also produced fruiting bodies, which supported secondary homothallism. Next, SSIs that clearly contained only one MAT-A locus (homothallism) were also able to fruit, demonstrating that self-fertile SSIs were not, per definition, secondary homothallic, and that a third life cycle or genetic mechanism must exist. Finally, recombination between SV markers was normal, yet 10 out of 24 SV markers showed 1:2 or 1:3 distributions in the spores, and large numbers of SSIs contained doubled SV markers. This indicated selfish genes, and possibly partial aneuploidy.

Indexed as

Genes, Mating Type, FungalGenetic VariationGenome, FungalAmino Acid SequenceAneuploidyBreedingChromosome MappingFruiting Bodies, FungalGenetic LociGenetic MarkersKaryotypingPhylogenyRecombination, GeneticSequence AlignmentSequence Homology, Amino AcidSpores, FungalGenetic Markersamphithallicaneuploidygenomic analysismating-type systemVolvariella volvacea

Identifiers

PMID27194800
PMCPMC4938666

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.