Evidence map›Paper›PMID 27194724›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Broadly neutralizing epitopes in the Plasmodium vivax vaccine candidate Duffy Binding Protein.

Edwin Chen, Nichole D Salinas, Yining Huang, Francis Ntumngia, Manolo D Plasencia, Michael L Gross, John H Adams, Niraj Harish Tolia

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
13.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 88 citations in OpenAlex.

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  11. Naturally-acquired and Vaccine-induced Human Monoclonal Antibodies tobioRxiv : the preprint server for biology · 2023
    Article
  12. Article
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  14. Inhibition of a malaria host-pathogen interaction by a computationally designed inhibitor.Protein science : a publication of the Protein Society · 2023
    Article
  15. Review
  16. Article
  17. Review
  18. Frontiers in immunology · 2022
    Review
  19. Frontiers in cellular and infection microbiology · 2022
    Review
  20. Article

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Edwin ChenDepartment of Molecular Microbiology, Washington University School of Medicine in St. Louis, St. Louis, MO 63110;
Nichole D SalinasDepartment of Molecular Microbiology, Washington University School of Medicine in St. Louis, St. Louis, MO 63110;
Yining HuangDepartment of Chemistry, Washington University School of Medicine in St. Louis, St. Louis, MO 63110;
Francis NtumngiaGlobal Health Infectious Disease Research, Department of Global Health, College of Public Health, University of South Florida, Tampa, FL 33620;
Manolo D PlasenciaDepartment of Chemistry, Washington University School of Medicine in St. Louis, St. Louis, MO 63110;
Michael L GrossDepartment of Chemistry, Washington University School of Medicine in St. Louis, St. Louis, MO 63110;
John H AdamsGlobal Health Infectious Disease Research, Department of Global Health, College of Public Health, University of South Florida, Tampa, FL 33620;
Niraj Harish ToliaDepartment of Molecular Microbiology, Washington University School of Medicine in St. Louis, St. Louis, MO 63110; Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine in St. Louis, St. Louis, MO 63110 tolia@wustl.edu.
Washington University in St. Louis · USUniversity of South Florida · US

Funding

Infectious Diseases/Basic Microbial Pathogenic MechanismsT32AI007172 · NIAID · WASHINGTON UNIVERSITY · PI Daniel E. Goldberg, JENNIFER A PHILIPS · 1985 to 2026
$13.0M
Immunological characterization of the P. vivax DBPR01AI064478 · NIAID · UNIVERSITY OF SOUTH FLORIDA · PI ADAMS, JOHN H · 2006 to 2023
$9.6M
Viral Discovery in Rheumatoid ArthritisP30AR048335 · NIAMS · WASHINGTON UNIVERSITY · PI WEIHL, CONRAD C · 2001 to 2015
$8.9M
ELUCIDATING & DISRUPTING PLASMODIUM RECEPTOR-LIGAND INTERACTIONSR56AI080792 · NIAID · WASHINGTON UNIVERSITY · PI TOLIA, NIRAJ H. · 2015 to 2015
$381k
NIAID NIH HHS HHSN272201400018CNIAID NIH HHS R01 AI064478NIAID NIH HHS R56 AI080792NIAID NIH HHS T32 AI007172NIAMS NIH HHS P30 AR048335
6 · The paper itself

Abstract

Plasmodium vivax Duffy Binding Protein (PvDBP) is the most promising vaccine candidate for P. vivax malaria. The polymorphic nature of PvDBP induces strain-specific immune responses, however, and the epitopes of broadly neutralizing antibodies are unknown. These features hamper the rational design of potent DBP-based vaccines and necessitate the identification of globally conserved epitopes. Using X-ray crystallography, small-angle X-ray scattering, hydrogen-deuterium exchange mass spectrometry, and mutational mapping, we have defined epitopes for three inhibitory mAbs (mAbs 2D10, 2H2, and 2C6) and one noninhibitory mAb (3D10) that engage DBP. These studies expand the currently known inhibitory epitope repertoire by establishing protective motifs in subdomain three outside the receptor-binding and dimerization residues of DBP, and introduce globally conserved protective targets. All of the epitopes are highly conserved among DBP alleles. The identification of broadly conserved epitopes of inhibitory antibodies provides critical motifs that should be retained in the next generation of potent vaccines for P. vivax malaria.

Indexed as

Amino Acid SequenceAntibodies, MonoclonalAntibodies, NeutralizingAntigens, ProtozoanCrystallography, X-RayEnzyme-Linked Immunosorbent AssayEpitopes, B-LymphocyteErythrocytesGenetic VariationHumansMalaria VaccinesMalaria, VivaxModels, MolecularPlasmodium vivaxProtein BindingProtein ConformationAntibodies, MonoclonalAntibodies, NeutralizingAntigens, ProtozoanDuffy antigen binding protein, PlasmodiumEpitopes, B-LymphocyteMalaria VaccinesProtozoan ProteinsReceptors, Cell Surfacebroadly neutralizingDuffy Binding ProteinepitopesmalariaPlasmodium vivax

Identifiers

PMID27194724
PMCPMC4896725
OpenAlexW2406803260

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.