Evidence map›Paper›PMID 27194112›Full record

ArticleScientific reports2016

Proteome-wide drug screening using mass spectrometric imaging of bead-arrays.

Ying Zhou, Ziying Liu, Kenneth J Rothschild, Mark J Lim

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. Protein Microarray Analysis with GenePix.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  2. Review
  3. Highly Multiplexed Immunohistochemical MALDI-MS Imaging of Biomarkers in Tissues.Journal of the American Society for Mass Spectrometry · 2021
    Article
  4. Article
  5. Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ying ZhouAmberGen, Inc., 313 Pleasant Street, Watertown, MA 02472, United States.
Ziying LiuAmberGen, Inc., 313 Pleasant Street, Watertown, MA 02472, United States.
Kenneth J RothschildAmberGen, Inc., 313 Pleasant Street, Watertown, MA 02472, United States.
Mark J LimAmberGen, Inc., 313 Pleasant Street, Watertown, MA 02472, United States.
Ambergen (United States) · US

Funding

Proteome Bead-Display for Discovery of Tumor AntigensR44CA137948 · NCI · AMBERGEN, INC · PI LIM, MARK · 2012 to 2014
$1.5M
Global Proteomic Screening by MALDI Spectrometric Imaging of Protein-Bead ArraysR44CA161965 · NCI · AMBERGEN, INC · PI LIM, MARK · 2014 to 2015
$999k
Photocleavable Bead Technology for GlycomicsR43GM105249 · NIGMS · AMBERGEN, INC · PI LIM, MARK · 2012 to 2013
$698k
NCI NIH HHS R44 CA137948NCI NIH HHS R44 CA161965NIGMS NIH HHS R43 GM105249
6 · The paper itself

Abstract

A fundamental challenge in the drug discovery process is to develop compounds with high efficacy and minimal side-effects. We describe a new approach to proteome-wide drug screening for detection of on- and off-target binding which combines the advantages of mass spectrometry with microarray technology. The method involves matrix-assisted laser desorption/ionization mass spectrometric imaging (MALDI-MSI) of agarose micro-beads randomly arrayed at high-density in custom micro-well plates. Each bead carries a unique protein target and a corresponding photocleavable mass-tag for coding (PC-Mass-Tag). Compounds bound to specific protein beads and a photo-released coding PC-Mass-Tag are detected simultaneously using MALDI-MSI. As an initial demonstration of this approach, two kinase-targeted drugs, Dasatinib and Brigatinib (AP26113), were simultaneously screened against a model 50-member kinase-bead library. A MALDI-MSI scan performed at the equivalent density of 495,000 beads in the footprint of a microscope slide yielded 100% sensitivity for detecting known strong interactions with no false positives.

Indexed as

DasatinibDrug Evaluation, PreclinicalMass SpectrometryMicrospheresOrganophosphorus CompoundsProtein Array AnalysisProtein BindingProtein Kinase InhibitorsProteomePyrimidinesSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationbrigatinibDasatinibOrganophosphorus CompoundsProtein Kinase InhibitorsProteomePyrimidines

Identifiers

PMID27194112
PMCPMC4872124
OpenAlexW2396663013

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.