Evidence map›Paper›PMID 27194026›Full record

ArticleMarine biotechnology (New York, N.Y.)2016

Cloning, Characterization, and Expression Levels of the Nectin Gene from the Tube Feet of the Sea Urchin Paracentrotus Lividus.

Duarte Toubarro, Analuce Gouveia, Raquel Mesquita Ribeiro, Nélson Simões, Gonçalo da Costa, Carlos Cordeiro, Romana Santos

Abstract read
PubMed Publisher
In one paragraph

Article in Marine biotechnology (New York, N.Y.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
  2. Morphological and Mechanical Tube Feet Plasticity among Populations of Sea Urchin (Integrative organismal biology (Oxford, England) · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. A mechanism for temporary bioadhesion.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Duarte ToubarroCentro de Biotecnologia dos Açores, Departamento de Biologia, Universidade dos Açores, 9501-801, Ponta Delgada, Açores, Portugal.
Analuce GouveiaCentro de Biotecnologia dos Açores, Departamento de Biologia, Universidade dos Açores, 9501-801, Ponta Delgada, Açores, Portugal.
Raquel Mesquita RibeiroCentro de Química e Bioquímica, Faculdade de Ciências da Universidade de Lisboa, Campo Grande, 1749-016, Lisboa, Portugal.
Nélson SimõesCentro de Biotecnologia dos Açores, Departamento de Biologia, Universidade dos Açores, 9501-801, Ponta Delgada, Açores, Portugal.
Gonçalo da CostaCentro de Química e Bioquímica, Faculdade de Ciências da Universidade de Lisboa, Campo Grande, 1749-016, Lisboa, Portugal.
Carlos CordeiroCentro de Química e Bioquímica, Faculdade de Ciências da Universidade de Lisboa, Campo Grande, 1749-016, Lisboa, Portugal.
Romana SantosCentro de Química e Bioquímica, Faculdade de Ciências da Universidade de Lisboa, Campo Grande, 1749-016, Lisboa, Portugal. romana.santos@campus.ul.pt.
University of Lisbon · PTUniversidade dos Açores · PT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Marine bioadhesives perform in ways that manmade products simply cannot match, especially in wet environments. Despite their technological potential, bioadhesive molecular mechanisms are still largely understudied, and sea urchin adhesion is no exception. These animals inhabit wave-swept shores, relying on specialized adhesive organs, tube feet, composed by an adhesive disc and a motile stem. The disc encloses a duo-gland adhesive system, producing adhesive and deadhesive secretions for strong reversible substratum attachment. The disclosure of sea urchin Paracentrotus lividus tube foot disc proteome led to the identification of a secreted adhesion protein, Nectin, never before reported in adult adhesive organs but, that given its adhesive function in eggs/embryos, was pointed out as a putative substratum adhesive protein in adults. To further understand Nectin involvement in sea urchin adhesion, Nectin cDNA was amplified for the first time from P. lividus adhesive organs, showing that not only the known Nectin mRNA, called Nectin-1 (GenBank AJ578435), is expressed in the adults tube feet but also a new mRNA sequence, called Nectin-2 (GenBank KT351732), differing in 15 missense nucleotide substitutions. Nectin genomic DNA was also obtained for the first time, indicating that both Nectin-1 and Nectin-2 derive from a single gene. In addition, expression analysis showed that both Nectins are overexpressed in tube feet discs, its expression being significantly higher in tube feet discs from sea urchins just after collection from the field relative to sea urchin from aquarium. These data further advocate for Nectin involvement in sea urchin reversible adhesion, suggesting that its expression might be regulated according to the hydrodynamic conditions.

Indexed as

Alternative SplicingAdhesivenessAdhesivesAmino Acid SequenceAmino Acid SubstitutionAnimalsCell Adhesion MoleculesCloning, MolecularDNA, ComplementaryEscherichia coliMechanotransduction, CellularNectinsOrgan SpecificityParacentrotusProtein IsoformsProteomeAdhesivesCell Adhesion MoleculesDNA, ComplementaryNectinsProtein IsoformsProteomeRecombinant ProteinsRNA, MessengerMarine adhesionNectinSea urchinSubstratum adhesive proteinTube feet

Identifiers

PMID27194026
OpenAlexW2400169595

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.