Evidence map›Paper›PMID 27193710›Full record

ArticleDoklady. Biochemistry and biophysics2016

Temperature dependence of protein fluorescence in Rb. sphaeroides reaction centers frozen to 80 K in the dark or on the actinic light as the indicator of protein conformational dynamics.

P P Knox, B N Korvatovsky, P M Krasilnikov, V Z Paschenko, N H Seifullina, N P Grishanova, A B Rubin

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Article in Doklady. Biochemistry and biophysics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

P P KnoxBiological Faculty, Moscow State University, Moscow, 119991, Russia. knox@biophys.msu.ru.
B N KorvatovskyBiological Faculty, Moscow State University, Moscow, 119991, Russia.
P M KrasilnikovBiological Faculty, Moscow State University, Moscow, 119991, Russia.
V Z PaschenkoBiological Faculty, Moscow State University, Moscow, 119991, Russia.
N H SeifullinaBiological Faculty, Moscow State University, Moscow, 119991, Russia.
N P GrishanovaBiological Faculty, Moscow State University, Moscow, 119991, Russia.
A B RubinBiological Faculty, Moscow State University, Moscow, 119991, Russia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The differences in the average fluorescence lifetime (τav) of tryptophanyls in photosynthetic reaction center (RC) of the purple bacteria Rb. sphaeroides frozen to 80 K in the dark or on the actinic light was found. This difference disappeared during subsequent heating at the temperatures above 250 K. The computer-based calculation of vibration spectra of the tryptophan molecule was performed. As a result, the normal vibrational modes associated with deformational vibrations of the aromatic ring of the tryptophan molecule were found. These deformational vibrations may be active during the nonradiative transition of the molecule from the excited to the ground state. We assume that the differences in τav may be associated with the change in the activity of these vibration modes due to local variations in the microenvironment of tryptophanyls during the light activation.

Indexed as

FluorescenceTemperatureBacterial ProteinsGlycerolModels, MolecularPhotosynthetic Reaction Center Complex ProteinsProtein ConformationRhodobacter sphaeroidesTryptophanVibrationWaterBacterial ProteinsGlycerolPhotosynthetic Reaction Center Complex ProteinsTryptophanWater

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.