Evidence map›Paper›PMID 27193446›Full record

ArticleScientific reports2016

Single molecule targeted sequencing for cancer gene mutation detection.

Yan Gao, Liwei Deng, Qin Yan, Yongqian Gao, Zengding Wu, Jinsen Cai, Daorui Ji, Gailing Li, Ping Wu, Huan Jin and 5 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Cell Separations and Sorting.Analytical chemistry · 2020
    Review
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 2 countries.

Yan GaoDirect Genomics Co., Ltd., Shenzhen, Guangdong, 518055, China.
Liwei DengDirect Genomics Co., Ltd., Shenzhen, Guangdong, 518055, China.
Qin YanDirect Genomics Co., Ltd., Shenzhen, Guangdong, 518055, China.
Yongqian GaoKey Laboratory of Flexible Electronics &Institute of Advanced Materials, Jiangsu National Synergetic Innovation Center for Advanced Materials, Nanjing Tech University, Nanjing, 211816, China.
Zengding WuDirect Genomics Co., Ltd., Shenzhen, Guangdong, 518055, China.
Jinsen CaiDirect Genomics Co., Ltd., Shenzhen, Guangdong, 518055, China.
Daorui JiDirect Genomics Co., Ltd., Shenzhen, Guangdong, 518055, China.
Gailing LiDirect Genomics Co., Ltd., Shenzhen, Guangdong, 518055, China.
Ping WuDirect Genomics Co., Ltd., Shenzhen, Guangdong, 518055, China.
Huan JinDirect Genomics Co., Ltd., Shenzhen, Guangdong, 518055, China.
Luyang ZhaoChemistry Department, North Carolina State University, Raleigh, NC, 27695, USA.
Song LiuClinical Medical Research Center, the Second Clinical Medical College of Jinan University (Shenzhen People's Hospital), Shenzhen, Guangdong, 518020, China.
Liangjin GeDirect Genomics Co., Ltd., Shenzhen, Guangdong, 518055, China.
Michael W DeemDepartments of Bioengineering and Physics &Astronomy, Rice University, Houston, TX, 77005, USA.
Jiankui HeDirect Genomics Co., Ltd., Shenzhen, Guangdong, 518055, China.
BGI Group (China) · CNJinan University · CNNanjing Tech University · CNNorth Carolina State University · USRice University · USSouthern University of Science and Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

With the rapid decline in cost of sequencing, it is now affordable to examine multiple genes in a single disease-targeted clinical test using next generation sequencing. Current targeted sequencing methods require a separate step of targeted capture enrichment during sample preparation before sequencing. Although there are fast sample preparation methods available in market, the library preparation process is still relatively complicated for physicians to use routinely. Here, we introduced an amplification-free Single Molecule Targeted Sequencing (SMTS) technology, which combined targeted capture and sequencing in one step. We demonstrated that this technology can detect low-frequency mutations using artificially synthesized DNA sample. SMTS has several potential advantages, including simple sample preparation thus no biases and errors are introduced by PCR reaction. SMTS has the potential to be an easy and quick sequencing technology for clinical diagnosis such as cancer gene mutation detection, infectious disease detection, inherited condition screening and noninvasive prenatal diagnosis.

Indexed as

Genes, NeoplasmMutationHigh-Throughput Nucleotide SequencingHumansNeoplasmsPathology, MolecularSequence Analysis, DNA

Identifiers

PMID27193446
PMCPMC4872154
OpenAlexW2397048191

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.