Evidence map›Paper›PMID 27193098›Full record

ArticleProtoplasma2017

Cell death patterns in Arabidopsis cells subjected to four physiological stressors indicate multiple signalling pathways and cell cycle phase specificity.

Ranjith Pathirana, Phillip West, Duncan Hedderley, Jocelyn Eason

Abstract read
PubMed Publisher
In one paragraph

Article in Protoplasma, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Plant Cell Cultures as a Tool to Study Programmed Cell Death.International journal of molecular sciences · 2021
    Review
  3. Plant Cell Wall Proteomics: A Focus on Monocot Species,International journal of molecular sciences · 2019
    Review
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ranjith PathiranaThe New Zealand Institute for Plant & Food Research Limited, Private Bag 11600, Palmerston North, New Zealand. ranjith.pathirana@plantandfood.co.nz.
Phillip WestThe New Zealand Institute for Plant & Food Research Limited, Private Bag 11600, Palmerston North, New Zealand.
Duncan HedderleyThe New Zealand Institute for Plant & Food Research Limited, Private Bag 11600, Palmerston North, New Zealand.
Jocelyn EasonThe New Zealand Institute for Plant & Food Research Limited, Private Bag 11600, Palmerston North, New Zealand.
Plant & Food Research · NZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Corpse morphology, nuclear DNA fragmentation, expression of senescence-associated genes (SAG) and cysteine protease profiles were investigated to understand cell death patterns in a cell cycle-synchronised Arabidopsis thaliana cell suspension culture treated with four physiological stressors in the late G2 phase. Within 4 h of treatment, polyethylene glycol (PEG, 20 %), mannose (100 mM) and hydrogen peroxide (2 mM) caused DNA fragmentation coinciding with cell permeability to Evans Blue (EB) and produced corpse morphology corresponding to apoptosis-like programmed cell death (AL-PCD) with cytoplasmic retraction from the cell wall. Ethylene (8 mL per 250-mL flask) caused permeability of cells to EB without concomitant nuclear DNA fragmentation and cytoplasmic retraction, suggesting necrotic cell death. Mannose inducing glycolysis block and PEG causing dehydration resulted in relatively similar patterns of upregulation of SAG suggesting similar cell death signalling pathways for these two stress factors, whereas hydrogen peroxide caused unique patterns indicating an alternate pathway for cell death induced by oxidative stress. Ethylene did not cause appreciable changes in SAG expression, confirming necrotic cell death. Expression of AtDAD, BoMT1 and AtSAG2 genes, previously shown to be associated with plant senescence, also changed rapidly during AL-PCD in cultured cells. The profiles of nine distinct cysteine protease-active bands ranging in size from ca. 21.5 to 38.5 kDa found in the control cultures were also altered after treatment with the four stressors, with mannose and PEG again producing similar patterns. Results also suggest that cysteine proteases may have a role in necrotic cell death.

Indexed as

Cell CycleSignal TransductionStress, PhysiologicalAphidicolinArabidopsisArabidopsis ProteinsCell DeathCell ShapeCysteine ProteasesDiploidyFlow CytometryG2 PhaseGene Expression Regulation, PlantGenes, PlantHistonesIn Situ Nick-End LabelingAphidicolinArabidopsis ProteinsCysteine ProteasesHistonesCysteine proteaseEthyleneGene expressionMannoseNecrosisOsmotic stressOxidative stressProgrammed cell death

Identifiers

PMID27193098
OpenAlexW2398985750

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.