Evidence map›Paper›PMID 27193062›Full record

ArticleNature communications2016

A genome-wide association scan implicates DCHS2, RUNX2, GLI3, PAX1 and EDAR in human facial variation.

Kaustubh Adhikari, Macarena Fuentes-Guajardo, Mirsha Quinto-Sánchez, Javier Mendoza-Revilla, Juan Camilo Chacón-Duque, Victor Acuña-Alonzo, Claudia Jaramillo, William Arias, Rodrigo Barquera Lozano, Gastón Macín Pérez and 22 more

Open access · goldAbstract readMulticenter Study
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 99 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
99citing papers in PubMed, 5 pooled it
15.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

99 citing papers in PubMed, 5 syntheses or guidelines pooled it, 204 citations in OpenAlex.

  1. Pooled it
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  4. Pooled it
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  6. Trial
  7. Review
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  12. GWAS for Periodontitis Phenotypes Using Multi-Ancestry All of Us Research Platform.medRxiv : the preprint server for health sciences · 2025
    Article
  13. Association ofInternational journal of molecular sciences · 2025
    Article
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  20. Genetic factors underlying Mandibular prognathism: insights from recent human and animal studies.Mammalian genome : official journal of the International Mammalian Genome Society · 2025
    Review

39 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

32 authors at 11 institutions in 9 countries.

Kaustubh AdhikariDepartment of Genetics, Evolution and Environment, UCL Genetics Institute, University College London, London WC1E 6BT, UK.
Macarena Fuentes-GuajardoDepartment of Genetics, Evolution and Environment, UCL Genetics Institute, University College London, London WC1E 6BT, UK.
Mirsha Quinto-SánchezCentro Nacional Patagónico, CONICET, Unidad de Diversidad, Sistematica y Evolucion, Puerto Madryn U912OACD, Argentina.
Javier Mendoza-RevillaDepartment of Genetics, Evolution and Environment, UCL Genetics Institute, University College London, London WC1E 6BT, UK.
Juan Camilo Chacón-DuqueDepartment of Genetics, Evolution and Environment, UCL Genetics Institute, University College London, London WC1E 6BT, UK.
Victor Acuña-AlonzoDepartment of Genetics, Evolution and Environment, UCL Genetics Institute, University College London, London WC1E 6BT, UK.
Claudia JaramilloGENMOL (Genética Molecular), Universidad de Antioquia, Medellín 5001000, Colombia.
William AriasGENMOL (Genética Molecular), Universidad de Antioquia, Medellín 5001000, Colombia.
Rodrigo Barquera LozanoLaboratorio de Genética Molecular, Escuela Nacional de Antropologia e Historia, México City 14030, México.
Gastón Macín PérezLaboratorio de Genética Molecular, Escuela Nacional de Antropologia e Historia, México City 14030, México.
Jorge Gómez-ValdésDepartamento de Anatomía, Facultad de Medicina, Universidad Nacional Autónoma de México (UNAM), México City 04510, México.
Hugo Villamil-RamírezUnidad de Genómica de Poblaciones Aplicada a la Salud, Facultad de Química, UNAM-Instituto Nacional de Medicina Genómica, México City 4510, México.
Tábita HunemeierDepartamento de Genética, Universidade Federal do Rio Grande do Sul, Porto Alegre 91501-970, Brasil.
Virginia RamalloCentro Nacional Patagónico, CONICET, Unidad de Diversidad, Sistematica y Evolucion, Puerto Madryn U912OACD, Argentina.
Caio C Silva de CerqueiraCentro Nacional Patagónico, CONICET, Unidad de Diversidad, Sistematica y Evolucion, Puerto Madryn U912OACD, Argentina.
Malena HurtadoLaboratorios de Investigación y Desarrollo, Facultad de Ciencias y Filosofía, Universidad Peruana Cayetano Heredia, Lima 31, Perú
Valeria VillegasLaboratorios de Investigación y Desarrollo, Facultad de Ciencias y Filosofía, Universidad Peruana Cayetano Heredia, Lima 31, Perú
Vanessa GranjaLaboratorios de Investigación y Desarrollo, Facultad de Ciencias y Filosofía, Universidad Peruana Cayetano Heredia, Lima 31, Perú
Carla GalloLaboratorios de Investigación y Desarrollo, Facultad de Ciencias y Filosofía, Universidad Peruana Cayetano Heredia, Lima 31, Perú
Giovanni PolettiLaboratorios de Investigación y Desarrollo, Facultad de Ciencias y Filosofía, Universidad Peruana Cayetano Heredia, Lima 31, Perú
Lavinia Schuler-FacciniDepartamento de Genética, Universidade Federal do Rio Grande do Sul, Porto Alegre 91501-970, Brasil.
Francisco M SalzanoDepartamento de Genética, Universidade Federal do Rio Grande do Sul, Porto Alegre 91501-970, Brasil.
Maria-Cátira BortoliniDepartamento de Genética, Universidade Federal do Rio Grande do Sul, Porto Alegre 91501-970, Brasil.
Samuel Canizales-QuinterosUnidad de Genómica de Poblaciones Aplicada a la Salud, Facultad de Química, UNAM-Instituto Nacional de Medicina Genómica, México City 4510, México.
Michael CheesemanDivision of Developmental Biology, The Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Midlothian EH25 9RG, UK.
Javier RosiqueDepartamento de Antropología, Universidad de Antioquia, Medellín 5001000, Colombia.
Gabriel BedoyaGENMOL (Genética Molecular), Universidad de Antioquia, Medellín 5001000, Colombia.
Francisco RothhammerInstituto de Alta Investigación, Universidad de Tarapacá, Arica 1000000, Chile.
Denis HeadonDivision of Developmental Biology, The Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Midlothian EH25 9RG, UK.
Rolando González-JoséCentro Nacional Patagónico, CONICET, Unidad de Diversidad, Sistematica y Evolucion, Puerto Madryn U912OACD, Argentina.
David BaldingDepartment of Genetics, Evolution and Environment, UCL Genetics Institute, University College London, London WC1E 6BT, UK.ORCID 0000-0002-1480-6115
Andrés Ruiz-LinaresDepartment of Genetics, Evolution and Environment, UCL Genetics Institute, University College London, London WC1E 6BT, UK.
Universidade Federal do Rio Grande do Sul · BRUniversidad Peruana Cayetano Heredia · PENational Institute of Genomic Medicine · MXUniversidad de Antioquia · COUniversity College London · GBCentro Científico Tecnológico Patagónico · ARRoslin Institute · GBUniversity of Tarapacá · CLNational Institute of Anthropology and History · MXThe University of Melbourne · AUUniversidad Nacional Autónoma de México · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We report a genome-wide association scan for facial features in ∼6,000 Latin Americans. We evaluated 14 traits on an ordinal scale and found significant association (P values<5 × 10(-8)) at single-nucleotide polymorphisms (SNPs) in four genomic regions for three nose-related traits: columella inclination (4q31), nose bridge breadth (6p21) and nose wing breadth (7p13 and 20p11). In a subsample of ∼3,000 individuals we obtained quantitative traits related to 9 of the ordinal phenotypes and, also, a measure of nasion position. Quantitative analyses confirmed the ordinal-based associations, identified SNPs in 2q12 associated to chin protrusion, and replicated the reported association of nasion position with SNPs in PAX3. Strongest association in 2q12, 4q31, 6p21 and 7p13 was observed for SNPs in the EDAR, DCHS2, RUNX2 and GLI3 genes, respectively. Associated SNPs in 20p11 extend to PAX1. Consistent with the effect of EDAR on chin protrusion, we documented alterations of mandible length in mice with modified Edar funtion.

Indexed as

AdultAnatomic VariationAnimalsCadherin Related ProteinsCore Binding Factor Alpha 1 SubunitEdar ReceptorFaceGenome-Wide Association StudyHumansLatin AmericaMaxillofacial DevelopmentMiceNerve Tissue ProteinsPaired Box Transcription FactorsPolymorphism, Single NucleotideYoung AdultCadherin Related ProteinsCore Binding Factor Alpha 1 SubunitDCHS2 protein, humanEDAR protein, humanEdar protein, mouseEdar ReceptorGLI3 protein, humanNerve Tissue ProteinsPaired Box Transcription FactorsPAX1 transcription factorRUNX2 protein, humanZinc Finger Protein Gli3

Identifiers

PMID27193062
PMCPMC4874031
OpenAlexW2401282820

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.