ArticlePeerJ2016
Heat shock factors in tomatoes: genome-wide identification, phylogenetic analysis and expression profiling under development and heat stress.
Article in PeerJ, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers, 1 of them a synthesis that pooled it.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
51 citing papers in PubMed, 1 synthesis or guideline pooled it, 105 citations in OpenAlex.
- Physiological and Molecular Approaches for Developing Thermotolerance in Vegetable Crops: A Growth, Yield and Sustenance Perspective.Frontiers in plant science · 2022Pooled it
- Genome-wide analysis of the HSF gene family in lily and functional characterization of LdHSFC1 under heat stress.Plant cell reports · 2026Article
- Genome-Wide Characterization and Expression Analysis of Heat Shock Transcription Factors in Two Cultivars of Rice (International journal of molecular sciences · 2026Article
- Identification ofPlants (Basel, Switzerland) · 2026Article
- Genome-wide identification and expression analysis of heat shock factors in Plantago fengdouensis under abiotic stresses.BMC plant biology · 2026Article
- Genome-wide identification and expression analysis of the Hsf gene family in Rhododendron molle under heat stress.Genes & genomics · 2026Article
- PtHSF5, a HSF transcription factor from Pinellia Ternata positively regulates heat tolerance in Arabidopsis.BMC plant biology · 2025Article
- Glycosylated sterols enhance cold tolerance in tomato via membrane stabilization and jasmonate signaling.Plant physiology · 2025Article
- Heat shock factor ZmHsf17 positively regulates phosphatidic acid phosphohydrolase ZmPAH1 and enhances maize thermotolerance.Journal of experimental botany · 2025Article
- Strike at the root: exploring the transferability of heat stress tolerance in tomatoes by reciprocal grafting.Frontiers in plant science · 2025Article
- Genome-Wide Analysis of the Hsf Gene Family inInternational journal of molecular sciences · 2024Article
- Physiological and Genetic Aspects of Resistance to Abiotic Stresses inPlants (Basel, Switzerland) · 2024Review
- First Peek into the Transcriptomic Response in Heat-Stressed Tomato Inoculated withPlants (Basel, Switzerland) · 2024Article
- Heat-shock transcription factor HsfA8a regulates heat stress response in Sorbus pohuashanensis.Planta · 2024Article
- Genome-wide identification, classification and expression analysis of the heat shock transcription factor family in Garlic (Allium sativum L.).BMC plant biology · 2024Article
- Differential heat-response characteristics of two plastid isoforms of triose phosphate isomerase in tomato.Plant biotechnology journal · 2024Article
- Genome-Wide Identification ofInternational journal of molecular sciences · 2023Article
- Selenium Biofortification Impacts the Tomato Fruit Metabolome and Transcriptional Profile at Ripening.Journal of agricultural and food chemistry · 2023Article
- In-silico analysis of heat shock transcription factor (OsHSF) gene family in rice (Oryza sativa L.).BMC plant biology · 2023Article
- Development of homozygous tetraploid potato and whole genome doubling-induced the enrichment of H3K27ac and potentially enhanced resistance to cold-induced sweetening in tubers.Horticulture research · 2023Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
5 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The HSF (heat shock factor) gene family contains highly conserved plant-specific transcription factors that play an important role in plant high-temperature stress responses. The present study aimed to characterize the HSF transcription factor genes in tomato (Solanum lycopersicum), which is an important vegetable crop worldwide and the model plant for fruit development studies. Twenty-six SlyHSF genes were identified in tomato, and the phylogenetic analysis showed the possible evolution profile of subgroups among in the plant kingdom. A new group O was identified that involved HSF genes in primitive plant species, like in the green algae, mosses and lycophytes. The gene structure and motifs of each SlyHSF were comprehensively analyzed. We identified orthologous, co-orthologous and paralogous HSF gene pairs in tomato, Arabidopsis and rice, and constructed a complex interaction network among these genes. The SlyHSF genes were expressed differentially in different species and at a higher level in mature fruits. The qPCR analysis was performed and showed SlyHSF genes greatly participate in plant heat tolerant pathways. Our comprehensive genome-wide analysis provided insights into the HSF gene family of tomatoes.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.