Evidence map›Paper›PMID 27190598›Full record

ArticleACS medicinal chemistry letters2016

Structural Requirements and Docking Analysis of Amidine-Based Sphingosine Kinase 1 Inhibitors Containing Oxadiazoles.

Joseph D Houck, Thomas K Dawson, Andrew J Kennedy, Yugesh Kharel, Niels D Naimon, Saundra D Field, Kevin R Lynch, Timothy L Macdonald

Open access · greenAbstract read
In one paragraph

Article in ACS medicinal chemistry letters, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Review
  3. Room Temperature Synthesis of Bioactive 1,2,4-Oxadiazoles.International journal of molecular sciences · 2023
    Review
  4. Article
  5. Article
  6. Article
  7. Identifying novel sphingosine kinase 1 inhibitors as therapeutics against breast cancer.Journal of enzyme inhibition and medicinal chemistry · 2020
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Joseph D HouckDepartment of Chemistry, University of Virginia , McCormick Road, Charlottesville, Virginia 22904, United States.
Thomas K DawsonDepartment of Chemistry, University of Virginia , McCormick Road, Charlottesville, Virginia 22904, United States.
Andrew J KennedyDepartment of Chemistry, University of Virginia , McCormick Road, Charlottesville, Virginia 22904, United States.
Yugesh KharelDepartment of Pharmacology, University of Virginia , 1340 Jefferson Park Avenue, Charlottesville, Virginia 22904, United States.
Niels D NaimonDepartment of Chemistry, University of Virginia , McCormick Road, Charlottesville, Virginia 22904, United States.
Saundra D FieldDepartment of Chemistry, University of Virginia , McCormick Road, Charlottesville, Virginia 22904, United States.
Kevin R LynchDepartment of Pharmacology, University of Virginia , 1340 Jefferson Park Avenue, Charlottesville, Virginia 22904, United States.
Timothy L MacdonaldDepartment of Chemistry, University of Virginia, McCormick Road, Charlottesville, Virginia 22904, United States; Department of Pharmacology, University of Virginia, 1340 Jefferson Park Avenue, Charlottesville, Virginia 22904, United States.
McCormick (United States) · USUniversity of Virginia · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sphingosine 1-phosphate (S1P) is a potent growth-signaling lipid that has been implicated in cancer progression, inflammation, sickle cell disease, and fibrosis. Two sphingosine kinases (SphK1 and 2) are the source of S1P; thus, inhibitors of the SphKs have potential as targeted cancer therapies and will help to clarify the roles of S1P and the SphKs in other hyperproliferative diseases. Recently, we reported a series of amidine-based inhibitors with high selectivity for SphK1 and potency in the nanomolar range. However, these inhibitors display a short half-life. With the goal of increasing metabolic stability and maintaining efficacy, we designed an analogous series of molecules containing oxadiazole moieties. Generation of a library of molecules resulted in the identification of the most selective inhibitor of SphK1 reported to date (705-fold selectivity over SphK2), and we found that potency and selectivity vary significantly depending on the particular oxadiazole isomer employed. The best inhibitors were subjected to in silico molecular dynamics docking analysis, which revealed key insights into the binding of amidine-based inhibitors by SphK1. Herein, the design, synthesis, biological evaluation, and docking analysis of these molecules are described.

Indexed as

cancerinhibitoroxadiazolesSphingosine 1-phosphatesphingosine kinase

Identifiers

PMID27190598
PMCPMC4867490
OpenAlexW2300818930

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.