Evidence map›Paper›PMID 27189484›Full record

ArticleMolecular biotechnology2016

Aromatic Surfactant as Aggregating Agent for Aptamer-Gold Nanoparticle-Based Detection of Plasmodium Lactate Dehydrogenase.

Priyamvada Jain, Babina Chakma, Naveen Kumar Singh, Sanjukta Patra, Pranab Goswami

Abstract read
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In one paragraph

Article in Molecular biotechnology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 42 citations in OpenAlex.

  1. Review
  2. Review
  3. Aptamer-Based Technologies for Parasite Detection.Sensors (Basel, Switzerland) · 2023
    Review
  4. Article
  5. Article
  6. Aptamers isolated against mosquito-borne pathogens.World journal of microbiology & biotechnology · 2021
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Recent Advances in Aptamer Discovery and Applications.Molecules (Basel, Switzerland) · 2019
    Review
  12. Review
  13. Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Priyamvada JainDepartment of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati, Assam, 781039, India.
Babina ChakmaDepartment of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati, Assam, 781039, India.
Naveen Kumar SinghDepartment of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati, Assam, 781039, India.
Sanjukta PatraDepartment of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati, Assam, 781039, India.
Pranab GoswamiDepartment of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati, Assam, 781039, India. pgoswami@iitg.ernet.in.
Indian Institute of Technology Guwahati · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A novel ssDNA aptamer (P38), with a 40 mer random region flanked by primer-binding sites on both sides, targeting Plasmodium falciparum lactate dehydrogenase (PfLDH) has been developed through systematic evolution of ligands by exponential enrichment (SELEX), including counter SELEX against human lactate dehydrogenase A and B (hLDH A and B). The 2D structure of P38 shows the presence of three stem loops with a δG of -9.18 kcal/mol. EMSA studies on P38 complexes with the increasing concentration of PfLDH revealed a dissociation constant of 0.35 µM. P38 has been exploited for the quantitative detection of PfLDH using cationic surfactant-mediated aggregation of gold nanoparticles (16-nm diameter) as an optical probe. Among the three different cationic surfactants, characterized by different hydrocarbon tail groups, benzalkonium chloride (BCK) was found to be most efficient with a limit of detection of 281 ± 11 pM. This BCK-based approach with the novel highly selective aptamer provides simple and sensitive detection of PfLDH in the clinically relevant range.

Indexed as

Aptamers, NucleotideBenzalkonium CompoundsBiosensing TechniquesGoldHumansIsoenzymesLactate Dehydrogenase 5Limit of DetectionL-Lactate DehydrogenaseMalariaMetal NanoparticlesMolecular StructurePlasmodium falciparumProtozoan ProteinsSELEX Aptamer TechniqueSurface-Active AgentsAptamers, NucleotideBenzalkonium CompoundsGoldIsoenzymeslactate dehydrogenase 1Lactate Dehydrogenase 5L-Lactate DehydrogenaseProtozoan ProteinsSurface-Active AgentsAggregationColorimetric assayGold nanoparticleMalariaPlasmodium

Identifiers

PMID27189484
OpenAlexW2403376097

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.