Evidence map›Paper›PMID 27189278›Full record

ArticleYonsei medical journal2016

Metabolic Pathway Signatures Associated with Urinary Metabolite Biomarkers Differentiate Bladder Cancer Patients from Healthy Controls.

Won Tae Kim, Seok Joong Yun, Chunri Yan, Pildu Jeong, Ye Hwan Kim, Il Seok Lee, Ho Won Kang, Sunghyouk Park, Sung Kwon Moon, Yung Hyun Choi and 4 more

Open access · goldAbstract read
In one paragraph

Article in Yonsei medical journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 1 synthesis or guideline pooled it, 57 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Serum Trimethylamine-International journal of molecular sciences · 2026
    Article
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  8. Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. Review
  14. Targeting Energy Metabolism in Cancer Treatment.International journal of molecular sciences · 2022
    Review
  15. Article
  16. Article
  17. Article
  18. Analysis of Nuclear Encoded Mitochondrial Gene Networks in Cervical Cancer.Asian Pacific journal of cancer prevention : APJCP · 2021
    Article
  19. Specific Gut Microbiome and Serum Metabolome Changes in Lung Cancer Patients.Frontiers in cellular and infection microbiology · 2021
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 2 countries.

Won Tae KimDepartment of Urology, Chungbuk National University College of Medicine, Cheongju, Korea.
Seok Joong YunDepartment of Urology, Chungbuk National University College of Medicine, Cheongju, Korea.
Chunri YanDepartment of Urology, Chungbuk National University College of Medicine, Cheongju, Korea.
Pildu JeongDepartment of Urology, Chungbuk National University College of Medicine, Cheongju, Korea.
Ye Hwan KimDepartment of Urology, Chungbuk National University College of Medicine, Cheongju, Korea.
Il Seok LeeDepartment of Urology, Chungbuk National University College of Medicine, Cheongju, Korea.
Ho Won KangDepartment of Urology, Chungbuk National University College of Medicine, Cheongju, Korea.
Sunghyouk ParkCollege of Pharmacy, Natural Product Research Institute, Seoul National University, Seoul, Korea.
Sung Kwon MoonSchool of Food Science and Technology, Chung-Ang University, Anseong, Korea.
Yung Hyun ChoiDepartment of Biochemistry, Dongeui University College of Oriental Medicine, Busan, Korea.
Young Deuk ChoiDepartment of Urology, Graduate School of Medicine, Yonsei University, Seoul, Korea.
Isaac Yi KimSection of Urological Oncology, The Cancer Institute of New Jersey, Robert Wood Johnson Medical School, New Brunswick, NJ, USA.
Jayoung KimDepartment of Surgery, Harvard Medical School, Boston, MA, USA. Jayoung.Kim@cshs.org.
Wun Jae KimDepartment of Urology, Chungbuk National University College of Medicine, Cheongju, Korea. wjkim@chungbuk.ac.kr.
Chungbuk National University · KRYonsei University · KRChung-Ang University · KRHarvard University · USRutgers Cancer Institute of New JerseySeoul National University · KR

Funding

Urinary Metabolites in IC PBS DiagnosisR01DK100974 · NIDDK · CEDARS-SINAI MEDICAL CENTER · PI ANGER, JENNIFER TASH, KIM, JAYOUNG · 2013 to 2013
$416k
NIDDK NIH HHS R01 DK100974
6 · The paper itself

Abstract

purposeOur previous high-performance liquid chromatography-quadrupole time-of-flight mass spectrometry study identified bladder cancer (BCA)-specific urine metabolites, including carnitine, acylcarnitines, and melatonin. The objective of the current study was to determine which metabolic pathways are perturbed in BCA, based on our previously identified urinary metabolome. MATERIALS AND

methodsA total of 135 primary BCA samples and 26 control tissue samples from healthy volunteers were analyzed. The association between specific urinary metabolites and their related encoding genes was analyzed.

resultsSignificant alterations in the carnitine-acylcarnitine and tryptophan metabolic pathways were detected in urine specimens from BCA patients compared to those of healthy controls. The expression of eight genes involved in the carnitine-acylcarnitine metabolic pathway (CPT1A, CPT1B, CPT1C, CPT2, SLC25A20, and CRAT) or tryptophan metabolism (TPH1 and IDO1) was assessed by RT-PCR in our BCA cohort (n=135). CPT1B, CPT1C, SLC25A20, CRAT, TPH1, and IOD1 were significantly downregulated in tumor tissues compared to normal bladder tissues (p<0.05 all) of patients with non-muscle invasive BCA, whereas CPT1B, CPT1C, CRAT, and TPH1 were downregulated in those with muscle invasive BCA (p<0.05), with no changes in IDO1 expression.

conclusionAlterations in the expression of genes associated with the carnitine-acylcarnitine and tryptophan metabolic pathways, which were the most perturbed pathways in BCA, were determined.

Indexed as

AgedBiomarkersCarcinoma, Transitional CellCarnitineCase-Control StudiesFemaleHumansMaleMetabolic Networks and PathwaysMiddle AgedReal-Time Polymerase Chain ReactionRNA, MessengerUrinary Bladder NeoplasmsacylcarnitineBiomarkersCarnitineRNA, MessengerBladder cancerdiagnostic markergene expressionqRT-PCRurine metabolites

Identifiers

PMID27189278
PMCPMC4951461
OpenAlexW2399437454

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.