Evidence map›Paper›PMID 27189024›Full record

ArticleBMC infectious diseases2016

Fast and accurate prediction of positive and negative urine cultures by flow cytometry.

Bijan Moshaver, Foppie de Boer, Heidi van Egmond-Kreileman, Ellen Kramer, Coen Stegeman, Paul Groeneveld

Open access · goldAbstract readEvaluation Study
In one paragraph

Article in BMC infectious diseases, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 35 citations in OpenAlex.

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  14. No need for a urine culture in elderly hospitalized patients with a negative dipstick test result.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2018
    Article
  15. Article
  16. Review
  17. Unmet Need of Antenatal Screening for Asymptomatic Bacteriuria: A Risk Factor for Adverse Outcomes of Pregnancy.Indian journal of community medicine : official publication of Indian Association of Preventive & Social Medicine
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Bijan MoshaverDepartment of Clinical Chemistry, Isala Hospital, Zwolle, The Netherlands. moshaver@home.nl.
Foppie de BoerDepartment of Internal Medicine/Infectious Diseases, Isala Hospital, Zwolle, The Netherlands.
Heidi van Egmond-KreilemanDepartment of Clinical Chemistry, Isala Hospital, Zwolle, The Netherlands.
Ellen KramerDepartment of Clinical Chemistry, Isala Hospital, Zwolle, The Netherlands.
Coen StegemanDepartment of Internal Medicine/Division of Nephrology, University Medical Center Groningen and University of Groningen, Groningen, The Netherlands.
Paul GroeneveldDepartment of Internal Medicine/Infectious Diseases, Isala Hospital, Zwolle, The Netherlands.
Isala · NLUniversity of Groningen · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundUrinary tract infection (UTI) is a widespread infectious disease in humans. Urine culture, a huge workload in the microbiology laboratory, is still the standard diagnostic test for UTI, but most of the cultures are negative. A reliable screening method could reduce unnecessary cultures and quicken reporting of negative results.

methodsWe evaluated the usefulness of a flow cytometry (FC) screening method in the prediction of positive urine culture to reduce the number of urine cultures. The urine specimens sent to the laboratory for culture were tested with the flow cytometer Accuri C6. FC bacterial counts were compared to standard urine culture results to assess the best cut-off values.

resultsTwo hundred nine urine samples were included, of which 79 (37.8 %) were culture positive. On comparing the culture and the FC data in the ROC curve, the FC bacterial counts of ≥10(6) bacteria/mL provided a reliable screening for bacteriuria with a sensitivity and specificity of 99 and 58 %, respectively. All negative FC results (<10(6) bacteria/mL) showed a negative predictive value of 99 % with a negative likelihood ratio of 0.02. The FC bacterial counts of ≥10(8)/mL showed a positive predictive value of 99 % with a positive likelihood ratio of 60.9.

conclusionsCounting bacteria in human urine samples by the FC is a fast, accurate and cost-effective screening method for bacteriuria. Our results showed that FC is able to rule out UTI, which can lead to a substantial reduction (36 %) of urine cultures. It also demonstrated that this method predicts positive cultures accurately.

Indexed as

BacteriaBacterial LoadBacteriuriaFlow CytometryHumansLaboratoriesROC CurveSensitivity and SpecificityUrinalysisUrinary Tract InfectionsUrineFlow cytometryMicrobiological diagnosticsUrinary tract infection

Identifiers

PMID27189024
PMCPMC4869392
OpenAlexW2399054045

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.