Evidence map›Paper›PMID 27189006›Full record

ArticlePlanta2016

Identification and cloning of class II and III chitinases from alkaline floral nectar of Rhododendron irroratum, Ericaceae.

Hong-Guang Zha, Richard I Milne, Hong-Xia Zhou, Xiang-Yang Chen, Hang Sun

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Article in Planta, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Hong-Guang ZhaCollege of Life and Environment Sciences, Huangshan University, Anhui, 245041, China. zhahg@hsu.edu.cn.
Richard I MilneInstitute of Molecular Plant Sciences, University of Edinburgh, Edinburgh, EH9 3JH, UK.
Hong-Xia ZhouCollege of Life and Environment Sciences, Huangshan University, Anhui, 245041, China.
Xiang-Yang ChenCollege of Life and Environment Sciences, Huangshan University, Anhui, 245041, China.
Hang SunKey Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650204, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MAIN

conclusionClass II and III chitinases belonging to different glycoside hydrolase families were major nectarins in Rhododendron irroratum floral nectar which showed significant chitinolytic activity. Previous studies have demonstrated antimicrobial activity in plant floral nectar, but the molecular basis for the mechanism is still poorly understood. Two chitinases, class II (Rhchi2) and III (Rhchi3), were characterized from alkaline Rhododendron irroratum nectar by both SDS-PAGE and mass spectrometry. Rhchi2 (27 kDa) and Rhchi3 (29 kDa) are glycoside hydrolases (family 19 and 18) with theoretical pI of 8.19 and 7.04. The expression patterns of Rhchi2 and Rhchi3 were analyzed by semi-quantitative RT-PCR. Rhchi2 is expressed in flowers (corolla nectar pouches) and leaves while Rhchi3 is expressed in flowers. Chitinase in concentrated protein and fresh nectar samples was visualised by SDS-PAGE and chitinolytic activity in fresh nectar was determined spectrophotometrically via chitin-azure. Full length gene sequences were cloned with Tail-PCR and RACE. The amino acid sequence deduced from the coding region for these proteins showed high identity with known chitinases and predicted to be located in extracellular space. Fresh R. irroratum floral nectar showed significant chitinolytic activity. Our results demonstrate that class III chitinase (GH 18 family) also exists in floral nectar. The functional relationship between class II and III chitinases and the role of these pathogenesis-related proteins in antimicrobial activity in nectar is suggested.

Indexed as

AlkaliesAmino Acid SequenceChitinasesCloning, MolecularElectrophoresis, Polyacrylamide GelFlowersGene Expression ProfilingGene Expression Regulation, PlantHydrogen-Ion ConcentrationMass SpectrometryPlant LeavesPlant NectarPlant ProteinsReverse Transcriptase Polymerase Chain ReactionRhododendronSequence Homology, Amino AcidAlkalieschitinase, class IIIChitinasesPlant NectarPlant ProteinsAlkaline nectarChitinolytic activityClass II chitinaseClass III chitinaseGlycoside hydrolasePathogenesis-related proteins

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.