Evidence map›Paper›PMID 27188213›Full record

ArticleMetallomics : integrated biometal science2016

Ferric ions accumulate in the walls of metabolically inactivating Saccharomyces cerevisiae cells and are reductively mobilized during reactivation.

Joshua D Wofford, Jinkyu Park, Sean P McCormick, Mrinmoy Chakrabarti, Paul A Lindahl

Open access · greenAbstract read
In one paragraph

Article in Metallomics : integrated biometal science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. A kinetic mathematical model of comprehensive iron metabolism in a respiring yeast cell: a basic-pathways approach to solving a large system dynamically.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2026
    Article
  2. Article
  3. Bioengineering (Basel, Switzerland) · 2021
    Article
  4. Article
  5. Evidence that a respiratory shield inThe Journal of biological chemistry · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Joshua D WoffordDepartment of Chemistry, Texas A&M University, College Station, TX 77843-3255, USA. lindahl@chem.tamu.edu.
Jinkyu ParkDepartment of Chemistry, Texas A&M University, College Station, TX 77843-3255, USA. lindahl@chem.tamu.edu.
Sean P McCormickDepartment of Chemistry, Texas A&M University, College Station, TX 77843-3255, USA. lindahl@chem.tamu.edu.
Mrinmoy ChakrabartiDepartment of Chemistry, Texas A&M University, College Station, TX 77843-3255, USA. lindahl@chem.tamu.edu.
Paul A LindahlDepartment of Chemistry, Texas A&M University, College Station, TX 77843-3255, USA. lindahl@chem.tamu.edu and Department of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843, USA.
Mitchell Institute · USCollege Station Medical Center · USTexas A&M University · US

Funding

Iron in Mitochondrial Physiology and DiseaseR01GM084266 · NIGMS · TEXAS A&M UNIVERSITY · PI LINDAHL, PAUL A. · 2009 to 2017
$2.3M
NIGMS NIH HHS R01 GM084266
6 · The paper itself

Abstract

Mössbauer and EPR spectra of fermenting yeast cells before and after cell wall (CW) digestion revealed that CWs accumulated iron as cells transitioned from exponential to post-exponential growth. Most CW iron was mononuclear nonheme high-spin (NHHS) Fe(III), some was diamagnetic and some was superparamagnetic. A significant portion of CW Fe was removable by EDTA. Simulations using an ordinary-differential-equations-based model suggested that cells accumulate Fe as they become metabolically inactive. When dormant Fe-loaded cells were metabolically reactivated in Fe-deficient bathophenanthroline disulfonate (BPS)-treated medium, they grew using Fe that had been mobilized from their CWs AND using trace amounts of Fe in the Fe-deficient medium. When grown in Fe-deficient medium, Fe-starved cells contained the lowest cellular Fe concentrations reported for a eukaryotic cell. During metabolic reactivation of Fe-loaded dormant cells, Fe(III) ions in the CWs of these cells were mobilized by reduction to Fe(II), followed by release from the CW and reimport into the cell. BPS short-circuited this process by chelating mobilized and released Fe(II) ions before reimport; the resulting Fe(II)(BPS)3 complex adsorbed on the cell surface. NHHS Fe(II) ions appeared transiently during mobilization, suggesting that these ions were intermediates in this process. In the presence of chelators and at high pH, metabolically inactive cells leached CW Fe; this phenomenon probably differs from metabolic mobilization. The iron regulon, as reported by Fet3p levels, was not expressed during post-exponential conditions; Fet3p was maximally expressed in exponentially growing cells. Decreased expression of the iron regulon and metabolic decline combine to promote CW Fe accumulation.

Indexed as

Cell WallElectron Spin Resonance SpectroscopyFerric CompoundsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSpectroscopy, MossbauerFerric CompoundsSaccharomyces cerevisiae Proteins

Identifiers

PMID27188213
PMCPMC4945443
OpenAlexW2394571638

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.