Evidence map›Paper›PMID 27187592›Full record

ArticlePloS one2016

Pycnosomes: Condensed Endosomal Structures Secreted by Dictyostelium Amoebae.

Ayman Sabra, Jade Leiba, Lauriane Mas, Mathilde Louwagie, Yohann Couté, Agnès Journet, Pierre Cosson, Laurence Aubry

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Ayman SabraDepartment of Cell Physiology and Metabolism, Faculty of Medicine, University of Geneva, 1 rue Michel Servet, CH-1211, Geneva 4, Switzerland.
Jade LeibaDepartment of Cell Physiology and Metabolism, Faculty of Medicine, University of Geneva, 1 rue Michel Servet, CH-1211, Geneva 4, Switzerland.
Lauriane MasUniv. Grenoble Alpes, F-38000 Grenoble, France.
Mathilde LouwagieUniv. Grenoble Alpes, F-38000 Grenoble, France.
Yohann CoutéUniv. Grenoble Alpes, F-38000 Grenoble, France.
Agnès JournetUniv. Grenoble Alpes, F-38000 Grenoble, France.
Pierre CossonDepartment of Cell Physiology and Metabolism, Faculty of Medicine, University of Geneva, 1 rue Michel Servet, CH-1211, Geneva 4, Switzerland.
Laurence AubryUniv. Grenoble Alpes, F-38000 Grenoble, France.
University of Geneva · CHLaboratoire Biologie à Grande Échelle · FRCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FRInserm · FRUniversité Grenoble Alpes · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Dictyostelium discoideum has been used largely as a model organism to study the organization and function of the endocytic pathway. Here we describe dense structures present in D. discoideum endocytic compartments, which we named pycnosomes. Pycnosomes are constitutively secreted in the extracellular medium, from which they can be recovered by differential centrifugation. We identified the most abundant protein present in secreted pycnosomes, that we designated SctA. SctA defines a new family of proteins with four members in D. discoideum, and homologous proteins in other protists and eumetazoa. We developed a monoclonal antibody specific for SctA and used it to further characterize secreted and intracellular pycnosomes. Within cells, immunofluorescence as well as electron microscopy identified pycnosomes as SctA-enriched dense structures in the lumen of endocytic compartments. Pycnosomes are occasionally seen in continuity with intra-endosomal membranes, particularly in U18666A-treated cells where intraluminal budding is highly enhanced. While the exact nature, origin and cellular function of pycnosomes remain to be established, this study provides a first description of these structures as well as a characterization of reagents that can be used for further studies.

Indexed as

Amino Acid SequenceAnimalsAntibodies, MonoclonalBiological TransportDictyosteliumEndocytosisEndosomesIntracellular MembranesMiceProtozoan ProteinsAntibodies, MonoclonalProtozoan Proteins

Identifiers

PMID27187592
PMCPMC4871501
OpenAlexW2405953577

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.