Evidence map›Paper›PMID 27186888›Full record

ArticleNature communications2016

Congruent pattern of accessibility identifies minimal pore gate in a non-symmetric voltage-gated sodium channel.

Kevin Oelstrom, Baron Chanda

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Structures of closed and open states of a voltage-gated sodium channel.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Kevin OelstromDepartment of Neuroscience, School of Medicine and Public Health, University of Wisconsin, 1111 Highland Avenue, Room 5505, WIMR Tower II, Madison, Wisconsin 53705, USA.
Baron ChandaDepartment of Neuroscience, School of Medicine and Public Health, University of Wisconsin, 1111 Highland Avenue, Room 5505, WIMR Tower II, Madison, Wisconsin 53705, USA.ORCID http://orcid.org/0000-0003-4954-7034
University of Wisconsin System · US

Funding

Training Program in Translational Cardiovascular Science (TPTCS)T32HL007936 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI Lee Lochbaum Eckhardt, Gail A Robertson · 2001 to 2026
$11.6M
Training Program In Molecular AND Cellular PharmacologyT32GM008688 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI AUDHYA, ANJON · 1998 to 2020
$6.0M
Structural basis of modulation of Na+ channels by local anestheticsR01GM084140 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI CHANDA, BARON · 2008 to 2016
$3.3M
NHLBI NIH HHS T32 HL007936NIGMS NIH HHS R01 GM084140NIGMS NIH HHS T32 GM008688
6 · The paper itself

Abstract

Opening and closing of the central ion-conducting pore in voltage-dependent ion channels is gated by changes in membrane potential. Although a gate residue in the eukaryotic voltage-gated sodium channel has been identified, the minimal molecular determinants of this gate region remain unknown. Here, by measuring the closed- and open-state reactivity of MTSET to substituted cysteines in all the pore-lining helices, we show that the state-dependent accessibility is delineated by four hydrophobic residues at homologous positions in each domain. Introduced cysteines above these sites do not react with intracellular MTSET while the channels are closed and yet are rapidly modified while the channels are open. These findings, in conjunction with state-dependent metal cross-bridging, support the notion that the gate residues in each of the four S6 segments of the eukaryotic sodium channel form an occlusion for ions in the closed state and are splayed open on activation.

Indexed as

Amino AcidsAmino Acid SequenceAnimalsHydrophobic and Hydrophilic InteractionsIon Channel GatingMutationPorosityProtein DomainsTime FactorsVoltage-Gated Sodium ChannelsXenopus laevisZincAmino AcidsVoltage-Gated Sodium ChannelsZinc

Identifiers

PMID27186888
PMCPMC4873679
OpenAlexW2408234862

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.