ArticlePhysiology and molecular biology of plants : an international journal of functional plant biology2016
Assessment of genetic diversity of Saltol QTL among the rice (Oryza sativa L.) genotypes.
Article in Physiology and molecular biology of plants : an international journal of functional plant biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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16 citing papers in PubMed, 62 citations in OpenAlex.
- A method for screening salt stress tolerance in Indian mustard (Brassica juncea) (L.) Czern & Coss at seedling stage.Scientific reports · 2024Article
- Marker-Assisted Introgression of the Salinity Tolerance Locus Saltol in Temperate Japonica Rice.Rice (New York, N.Y.) · 2023Article
- Conventional and Omics Approaches for Understanding the Abiotic Stress Response in Cereal Crops-An Updated Overview.Plants (Basel, Switzerland) · 2022Review
- An Epigenetic Alphabet of Crop Adaptation to Climate Change.Frontiers in genetics · 2022Review
- Genome-Wide Association Analysis for Salt-Induced Phenotypic and Physiologic Responses in Rice at Seedling and Reproductive Stages.Frontiers in plant science · 2022Article
- Rapid Genome-Wide Location-Specific Polymorphic SSR Marker Discovery in Black Pepper by GBS Approach.Frontiers in plant science · 2022Article
- Whole-Genome Sequencing of KMR3 andFrontiers in plant science · 2022Article
- Haplotype and diversity analysis of indigenous rice for salinity tolerance in early-stage seedling using simple sequence repeat markers.Biotechnology reports (Amsterdam, Netherlands) · 2021Article
- Comparative Transcriptome Analysis Reveals the Mechanisms Underlying Differences in Salt Tolerance BetweenFrontiers in plant science · 2021Article
- Diversity analysis of selected rice landraces from West Bengal and their linked molecular markers for salinity tolerance.Physiology and molecular biology of plants : an international journal of functional plant biology · 2020Article
- Seedling stage salt stress response specific characterization of genetic polymorphism and validation of SSR markers in rice.Physiology and molecular biology of plants : an international journal of functional plant biology · 2019Article
- An Effective Screening Method and a Reliable Screening Trait for Salt Tolerance ofFrontiers in plant science · 2019Article
- Draft genome sequence of first monocot-halophytic species Oryza coarctata reveals stress-specific genes.Scientific reports · 2018Article
- Discovery of microRNA-target modules of African rice (Oryza glaberrima) under salinity stress.Scientific reports · 2018Article
- Article
- FirstF1000Research · 2017Article
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6 authors at 2 institutions in 1 country.
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No grant is acknowledged in the PubMed record.
Abstract
Eight Saltol quantitative trait locus (QTL) linked simple sequence repeat (SSR) markers of rice (Oryza sativa L.) were used to study the polymorphism of this QTL in 142 diverse rice genotypes that comprised salt tolerant as well as sensitive genotypes. The SSR profiles of the eight markers generated 99 alleles including 20rare alleles and 16 null alleles. RM8094 showed the highest number (13) of alleles followed by RM3412 (12), RM562 (11), RM493 (9) and RM1287 (8) while as, RM10764 and RM10745 showed the lowest number (6) of alleles. Based on the highest number of alleles and PIC value (0.991), we identified RM8094 as suitable marker for discerning salt tolerant genotypes from the sensitive ones. Based upon the haplotype analysis using FL478 as a reference (salt tolerant genotypes containing Saltol QTL), we short listed 68 rice genotypes that may have at least one allele of FL478 haplotype. Further study may confirm that some of these genotypes might have Saltol QTL and can be used as alternative donors in salt tolerant rice breeding programmes.
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