Evidence map›Paper›PMID 27185936›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Cryo-EM reveals the steric zipper structure of a light chain-derived amyloid fibril.

Andreas Schmidt, Karthikeyan Annamalai, Matthias Schmidt, Nikolaus Grigorieff, Marcus Fändrich

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Experimental methods for studying amyloid cross-interactions.Protein science : a publication of the Protein Society · 2025
    Review
  2. Article
  3. Article
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  5. Article
  6. Article
  7. Article
  8. Review
  9. The residual structure of acid-denatured βProtein science : a publication of the Protein Society · 2023
    Article
  10. Amyloidogenesis: What Do We Know So Far?International journal of molecular sciences · 2022
    Review
  11. The effect of mutation on an aggregation-prone protein: An in vivo, in vitro, and in silico analysis.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  12. Article
  13. Article
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  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Nanomechanical properties of steric zipper globular structures.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Andreas SchmidtInstitute of Protein Biochemistry, Ulm University, 89081 Ulm, Germany;
Karthikeyan AnnamalaiInstitute of Protein Biochemistry, Ulm University, 89081 Ulm, Germany;
Matthias SchmidtInstitute of Protein Biochemistry, Ulm University, 89081 Ulm, Germany;
Nikolaus GrigorieffJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147 marcus.faendrich@uni-ulm.de niko@grigorieff.org.
Marcus FändrichInstitute of Protein Biochemistry, Ulm University, 89081 Ulm, Germany; marcus.faendrich@uni-ulm.de niko@grigorieff.org.

Funding

Single particle reconstructionP01GM062580 · NIGMS · HARVARD MEDICAL SCHOOL · PI LI, ZONGLI · 2001 to 2016
$23.7M
NIGMS NIH HHS P01 GM062580
6 · The paper itself

Abstract

Amyloid fibrils are proteinaceous aggregates associated with diseases in humans and animals. The fibrils are defined by intermolecular interactions between the fibril-forming polypeptide chains, but it has so far remained difficult to reveal the assembly of the peptide subunits in a full-scale fibril. Using electron cryomicroscopy (cryo-EM), we present a reconstruction of a fibril formed from the pathogenic core of an amyloidogenic immunoglobulin (Ig) light chain. The fibril density shows a lattice-like assembly of face-to-face packed peptide dimers that corresponds to the structure of steric zippers in peptide crystals. Interpretation of the density map with a molecular model enabled us to identify the intermolecular interactions between the peptides and rationalize the hierarchical structure of the fibril based on simple chemical principles.

Indexed as

Models, MolecularAmino Acid SequenceAmyloidAmyloid beta-PeptidesCryoelectron MicroscopyHumansImmunoglobulin Light ChainsProtein ConformationProtein FoldingAmyloidAmyloid beta-PeptidesImmunoglobulin Light ChainsFrealixprionprotein aggregationprotein foldingsystemic amyloidosis

Identifiers

PMID27185936
PMCPMC4896715

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.