Evidence map›Paper›PMID 27185929›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Structure of faustovirus, a large dsDNA virus.

Thomas Klose, Dorine G Reteno, Samia Benamar, Adam Hollerbach, Philippe Colson, Bernard La Scola, Michael G Rossmann

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
11.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 96 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Exploring protein symmetry at the RCSB Protein Data Bank.Emerging topics in life sciences · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Thomas KloseDepartment of Biological Sciences, Purdue University, West Lafayette, IN 47907;
Dorine G RetenoUnité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes (URMITE), Unité Mixte de Recherche 63, CNRS 7278, Institut de Recherche pour le Développement 198, INSERM U1095, Aix-Marseille Université, 13005 Marseille, France;
Samia BenamarUnité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes (URMITE), Unité Mixte de Recherche 63, CNRS 7278, Institut de Recherche pour le Développement 198, INSERM U1095, Aix-Marseille Université, 13005 Marseille, France;
Adam HollerbachDepartment of Chemistry, Purdue University, West Lafayette, IN 47907.
Philippe ColsonUnité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes (URMITE), Unité Mixte de Recherche 63, CNRS 7278, Institut de Recherche pour le Développement 198, INSERM U1095, Aix-Marseille Université, 13005 Marseille, France;
Bernard La ScolaUnité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes (URMITE), Unité Mixte de Recherche 63, CNRS 7278, Institut de Recherche pour le Développement 198, INSERM U1095, Aix-Marseille Université, 13005 Marseille, France;
Michael G RossmannDepartment of Biological Sciences, Purdue University, West Lafayette, IN 47907; mr@purdue.edu.
Purdue University West Lafayette · USInserm · FRCentre National de la Recherche Scientifique · FRInstitut de Recherche pour le Développement · FR

Funding

STRUCTURE OF A SMALL SPHERICAL VIRUSR37AI011219 · NIAID · PURDUE UNIVERSITY WEST LAFAYETTE · PI ROSSMANN, MICHAEL G · 1986 to 2015
$6.6M
STRUCTURE OF A SMALL SPHERICAL VIRUSR01AI011219 · NIAID · PURDUE UNIVERSITY WEST LAFAYETTE · PI KUHN, RICHARD J. · 1985 to 2020
$2.4M
NIAID NIH HHS R01 AI011219NIAID NIH HHS R37 AI011219
6 · The paper itself

Abstract

Many viruses protect their genome with a combination of a protein shell with or without a membrane layer. Here we describe the structure of faustovirus, the first DNA virus (to our knowledge) that has been found to use two protein shells to encapsidate and protect its genome. The crystal structure of the major capsid protein, in combination with cryo-electron microscopy structures of two different maturation stages of the virus, shows that the outer virus shell is composed of a double jelly-roll protein that can be found in many double-stranded DNA viruses. The structure of the repeating hexameric unit of the inner shell is different from all other known capsid proteins. In addition to the unique architecture, the region of the genome that encodes the major capsid protein stretches over 17,000 bp and contains a large number of introns and exons. This complexity might help the virus to rapidly adapt to new environments or hosts.

Indexed as

Genome, ViralAsfarviridaeCapsid ProteinsCryoelectron MicroscopyCrystallography, X-RayDNA, ViralModels, MolecularVirionCapsid ProteinsDNA, Viraldouble-protein shellfaustovirusmajor capsid proteinstructure

Identifiers

PMID27185929
PMCPMC4896704
OpenAlexW2408002196

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.