Evidence map›Paper›PMID 27185885›Full record

ArticleNucleic acids research2016

G-rich telomeric and ribosomal DNA sequences from the fission yeast genome form stable G-quadruplex DNA structures in vitro and are unwound by the Pfh1 DNA helicase.

Marcus Wallgren, Jani B Mohammad, Kok-Phen Yan, Parham Pourbozorgi-Langroudi, Mahsa Ebrahimi, Nasim Sabouri

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 69 citations in OpenAlex.

  1. Regulation of Pfh1 helicase activity by nucleic acid interactions and mitochondrial SSB.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  10. Epigenomic Features and Potential Functions of KInternational journal of molecular sciences · 2022
    Article
  11. Role and Regulation of Pif1 Family Helicases at the Replication Fork.International journal of molecular sciences · 2022
    Review
  12. Article
  13. Treacle Sticks the Nucleolar Responses to DNA Damage Together.Frontiers in cell and developmental biology · 2022
    Review
  14. Article
  15. Article
  16. Review
  17. Review
  18. Role of the DDX11 DNA Helicase in Warsaw Breakage Syndrome Etiology.International journal of molecular sciences · 2021
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Marcus WallgrenDepartment of Medical Biochemistry and Biophysics, Umeå University, SE-901 87, Umeå, Sweden.
Jani B MohammadDepartment of Medical Biochemistry and Biophysics, Umeå University, SE-901 87, Umeå, Sweden.
Kok-Phen YanDepartment of Medical Biochemistry and Biophysics, Umeå University, SE-901 87, Umeå, Sweden.
Parham Pourbozorgi-LangroudiDepartment of Medical Biochemistry and Biophysics, Umeå University, SE-901 87, Umeå, Sweden.
Mahsa EbrahimiDepartment of Medical Biochemistry and Biophysics, Umeå University, SE-901 87, Umeå, Sweden.
Nasim SabouriDepartment of Medical Biochemistry and Biophysics, Umeå University, SE-901 87, Umeå, Sweden nasim.sabouri@umu.se.
Umeå University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Certain guanine-rich sequences have an inherent propensity to form G-quadruplex (G4) structures. G4 structures are e.g. involved in telomere protection and gene regulation. However, they also constitute obstacles during replication if they remain unresolved. To overcome these threats to genome integrity, organisms harbor specialized G4 unwinding helicases. In Schizosaccharomyces pombe, one such candidate helicase is Pfh1, an evolutionarily conserved Pif1 homolog. Here, we addressed whether putative G4 sequences in S. pombe can adopt G4 structures and, if so, whether Pfh1 can resolve them. We tested two G4 sequences, derived from S. pombe ribosomal and telomeric DNA regions, and demonstrated that they form inter- and intramolecular G4 structures, respectively. Also, Pfh1 was enriched in vivo at the ribosomal G4 DNA and telomeric sites. The nuclear isoform of Pfh1 (nPfh1) unwound both types of structure, and although the G4-stabilizing compound Phen-DC3 significantly enhanced their stability, nPfh1 still resolved them efficiently. However, stable G4 structures significantly inhibited adenosine triphosphate hydrolysis by nPfh1. Because ribosomal and telomeric DNA contain putative G4 regions conserved from yeasts to humans, our studies support the important role of G4 structure formation in these regions and provide further evidence for a conserved role for Pif1 helicases in resolving G4 structures.

Indexed as

DNADNA HelicasesDNA ReplicationDNA, RibosomalGene Expression Regulation, FungalG-QuadruplexesGuanineHumansNucleic Acid ConformationSchizosaccharomycesSchizosaccharomyces pombe ProteinsTelomereDNADNA HelicasesDNA, RibosomalGuaninePfh1 protein, S pombeSchizosaccharomyces pombe Proteins

Identifiers

PMID27185885
PMCPMC5291255
OpenAlexW2408465539

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.