Evidence map›Paper›PMID 27185466›Full record

ArticleScientific reports2016

Molecular determinants of plaque size as an indicator of dengue virus attenuation.

Kenneth Choon Meng Goh, Choon Kit Tang, Diana Catherine Norton, Esther Shuyi Gan, Hwee Cheng Tan, Bo Sun, Ayesa Syenina, Amjad Yousuf, Xin Mei Ong, Uma Sangumathi Kamaraj and 6 more

Abstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed.

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  8. Reemergence of Oropouche virus between 2023 and 2024 in Brazil.medRxiv : the preprint server for health sciences · 2024
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  17. 2019-20 H1N1 clade A5a.1 viruses have betterbioRxiv : the preprint server for biology · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Kenneth Choon Meng GohDuke-NUS Medical School, Singapore 169857, Singapore.
Choon Kit TangDuke-NUS Medical School, Singapore 169857, Singapore.
Diana Catherine NortonDuke University School of Medicine, Durham, North Carolina 27710, USA.
Esther Shuyi GanDuke-NUS Medical School, Singapore 169857, Singapore.
Hwee Cheng TanDuke-NUS Medical School, Singapore 169857, Singapore.
Bo SunDuke University School of Medicine, Durham, North Carolina 27710, USA.
Ayesa SyeninaDuke-NUS Medical School, Singapore 169857, Singapore.
Amjad YousufUniversity of Bristol, Bristol BS8 1TD, UK.
Xin Mei OngDuke-NUS Medical School, Singapore 169857, Singapore.
Uma Sangumathi KamarajDuke-NUS Medical School, Singapore 169857, Singapore.
Yin Bun CheungDuke-NUS Medical School, Singapore 169857, Singapore.
Duane J GublerDuke-NUS Medical School, Singapore 169857, Singapore.
Andrew DavidsonUniversity of Bristol, Bristol BS8 1TD, UK.
Ashley Lauren St JohnDuke-NUS Medical School, Singapore 169857, Singapore.
October Michael SessionsDuke-NUS Medical School, Singapore 169857, Singapore.
Eng Eong OoiDuke-NUS Medical School, Singapore 169857, Singapore.

Funding

Medical Research Council G0801973
6 · The paper itself

Abstract

The development of live viral vaccines relies on empirically derived phenotypic criteria, especially small plaque sizes, to indicate attenuation. However, while some candidate vaccines successfully translated into licensed applications, others have failed safety trials, placing vaccine development on a hit-or-miss trajectory. We examined the determinants of small plaque phenotype in two dengue virus (DENV) vaccine candidates, DENV-3 PGMK30FRhL3, which produced acute febrile illness in vaccine recipients, and DENV-2 PDK53, which has a good clinical safety profile. The reasons behind the failure of PGMK30FRhL3 during phase 1 clinical trial, despite meeting the empirically derived criteria of attenuation, have never been systematically investigated. Using in vitro, in vivo and functional genomics approaches, we examined infections by the vaccine and wild-type DENVs, in order to ascertain the different determinants of plaque size. We show that PGMK30FRhL3 produces small plaques on BHK-21 cells due to its slow in vitro growth rate. In contrast, PDK53 replicates rapidly, but is unable to evade antiviral responses that constrain its spread hence also giving rise to small plaques. Therefore, at least two different molecular mechanisms govern the plaque phenotype; determining which mechanism operates to constrain plaque size may be more informative on the safety of live-attenuated vaccines.

Indexed as

Viral Plaque AssayAnimalsCell LineCricetinaeDengue VaccinesDengue VirusHost-Pathogen InteractionsHumansVaccines, AttenuatedVirulenceDengue VaccinesVaccines, Attenuated

Identifiers

PMID27185466
PMCPMC4868997

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.