Evidence map›Paper›PMID 27184832›Full record

ArticleCancer medicine2016

Expressions of SH3BP5, LMO3, and SNAP25 in diffuse large B-cell lymphoma cells and their association with clinical features.

Kyoko Kobayashi, Motoko Yamaguchi, Kana Miyazaki, Hiroshi Imai, Kaori Yokoe, Ryoichi Ono, Tetsuya Nosaka, Naoyuki Katayama

Open access · goldAbstract read
In one paragraph

Article in Cancer medicine, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact, top 95% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Kyoko KobayashiDepartment of Hematology and Oncology, Mie University Graduate School of Medicine, Tsu, Japan.
Motoko YamaguchiDepartment of Hematology and Oncology, Mie University Graduate School of Medicine, Tsu, Japan.
Kana MiyazakiDepartment of Hematology and Oncology, Mie University Graduate School of Medicine, Tsu, Japan.
Hiroshi ImaiPathology Division, Mie University Hospital, Tsu, Japan.
Kaori YokoeMie University School of Medicine, Tsu, Japan.
Ryoichi OnoDepartment of Microbiology and Molecular Genetics, Mie University Graduate School of Medicine, Tsu, Japan.
Tetsuya NosakaDepartment of Microbiology and Molecular Genetics, Mie University Graduate School of Medicine, Tsu, Japan.
Naoyuki KatayamaDepartment of Hematology and Oncology, Mie University Graduate School of Medicine, Tsu, Japan.
Mie University · JPMie University Hospital · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Diffuse large B-cell lymphoma (DLBCL) is clinicopathologically and genetically heterogeneous with variable clinical outcomes. We previously identified signature genes overexpressed in CD5-positive (CD5(+) ) DLBCL, which is a poor prognostic subgroup of DLBCL. To elucidate the clinical significance of the protein expression of the signature genes overexpressed in CD5(+) DLBCL with regard to all DLBCL, not otherwise specified (NOS), 10 genes (SH3BP5, LMO3, SNAP25, SYT5, SV2C, CABP1, FGF1, FGFR2, NEUROD1, and SYN2) were selected and examined immunohistochemically with samples from 28 patients with DLBCL, NOS. Only three protein expressions, SH3BP5, LMO3, and SNAP25, were detected in DLBCL cells and then analyzed further with samples from 187 patients with DLBCL, NOS. The SH3BP5, LMO3, and SNAP25 proteins were expressed in 60% (103/173), 34% (59/175), and 46% (77/168) of DLBCL patients, respectively. These protein expressions were associated with CD5 expression, and only SH3BP5 was frequently expressed in activated B-cell-like DLBCL (P = 0.046). Compared to the SH3BP5-negative group, the SH3BP5(+) group was correlated with elderly onset (>60 years, P = 0.0096) and advanced-stage disease (stage III/IV, P = 0.037). The LMO3(+) group showed a worse performance status (>1, P = 0.0004). The SH3BP5(+) group and the LMO3(+) group had significantly worse overall survival than the negative groups (P = 0.030, 0.034; respectively) for the entire group. In a subgroup analysis of patients treated with rituximab-containing chemotherapy, there was no significant difference between groups. To the best of our knowledge, this is the first report showing the protein expressions of SH3BP5, LMO3, and SNAP25 in DLBCL cells and their clinical significance in patients with DLBCL. The SH3BP5 and LMO3 protein expressions are associated with the baseline clinical characteristics of DLBCL.

Indexed as

Adaptor Proteins, Signal TransducingAdultAgedAged, 80 and overAntigens, NeoplasmAntineoplastic Combined Chemotherapy ProtocolsBiomarkers, TumorFemaleGene ExpressionHumansKaplan-Meier EstimateLIM Domain ProteinsLymphoma, Large B-Cell, DiffuseMaleMiddle AgedNeoplasm ProteinsAdaptor Proteins, Signal TransducingAntigens, NeoplasmBiomarkers, TumorLIM Domain ProteinsLMO3 protein, humanNeoplasm ProteinsSH3BP5 protein, humanSNAP25 protein, humanSynaptosomal-Associated Protein 25CD5diffuse large B-cell lymphomaLMO3SH3BP5SNAP25

Identifiers

PMID27184832
PMCPMC4873606
OpenAlexW2399776258

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.