Evidence map›Paper›PMID 27181766›Full record

ArticleMolecular membrane biology

Electrostatic networks control plug stabilization in the PapC usher.

Thieng Pham, Nadine S Henderson, Glenn T Werneburg, David G Thanassi, Anne H Delcour

Open access · bronzeAbstract read
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Article in Molecular membrane biology. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Thieng Phama Department of Biology and Biochemistry , University of Houston , Houston , TX and.
Nadine S Hendersonb Center for Infectious Diseases and Department of Molecular Genetics and Microbiology, Stony Brook University , Stony Brook , NY , USA.
Glenn T Werneburgb Center for Infectious Diseases and Department of Molecular Genetics and Microbiology, Stony Brook University , Stony Brook , NY , USA.
David G Thanassib Center for Infectious Diseases and Department of Molecular Genetics and Microbiology, Stony Brook University , Stony Brook , NY , USA.
Anne H Delcoura Department of Biology and Biochemistry , University of Houston , Houston , TX and.
Stony Brook University · USUniversity of Houston · US

Funding

Mechanism of the Usher in Assembly and Secretion of PiliR01GM062987 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI David G Thanassi · 2001 to 2026
$7.7M
Catalytic mechanism of the usher in pilus biogenesis by uropathogenic E. coliF30AI112252 · NIAID · STATE UNIVERSITY NEW YORK STONY BROOK · PI WERNEBURG, GLENN THOMAS · 2015 to 2018
$162k
NIAID NIH HHS F30 AI112252NIGMS NIH HHS R01 GM062987
6 · The paper itself

Abstract

The PapC usher, a β-barrel pore in the outer membrane of uropathogenic Escherichia coli, is used for assembly of the P pilus, a key virulence factor in bacterial colonization of human kidney cells. Each PapC protein is composed of a 24-stranded β-barrel channel, flanked by N- and C-terminal globular domains protruding into the periplasm, and occluded by a plug domain (PD). The PD is displaced from the channel towards the periplasm during pilus biogenesis, but the molecular mechanism for PD displacement remains unclear. Two structural features within the β-barrel, an α-helix and β5-6 hairpin loop, may play roles in controlling plug stabilization. Here we have tested clusters of residues at the interface of the plug, barrel, α-helix and hairpin, which participate in electrostatic networks. To assess the roles of these residues in plug stabilization, we used patch-clamp electrophysiology to compare the activity of wild-type and mutant PapC channels containing alanine substitutions at these sites. Mutations interrupting each of two salt bridge networks were relatively ineffective in disrupting plug stabilization. However, mutation of two pairs of arginines located at the inner and the outer surfaces of the PD resulted in an enhanced propensity for plug displacement. One arginine pair involved in a repulsive interaction between the linkers that tether the plug to the β-barrel was particularly sensitive to mutation. These results suggest that plug displacement, which is necessary for pilus assembly and translocation, may require a weakening of key electrostatic interactions between the plug linkers, and the plug and the α-helix.

Indexed as

Amino Acid SubstitutionCell MembraneEscherichia coliEscherichia coli ProteinsHumansMutationPeriplasmPorinsProtein DomainsProtein StabilityProtein Structure, SecondaryStatic ElectricityatpG protein, E coliEscherichia coli ProteinsPorinsE. colipatch clampsecretion

Identifiers

PMID27181766
PMCPMC4962327
OpenAlexW2399030546

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.