Evidence map›Paper›PMID 27180909›Full record

ArticleScientific reports2016

Two common structural motifs for TCR recognition by staphylococcal enterotoxins.

Karin E J Rödström, Paulina Regenthal, Christopher Bahl, Alex Ford, David Baker, Karin Lindkvist-Petersson

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Three-Dimensional Modeling ofAntibodies (Basel, Switzerland) · 2025
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  9. Article
  10. Binding of Catechins to Staphylococcal Enterotoxin A.Molecules (Basel, Switzerland) · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Karin E J RödströmDepartment of Experimental Medical Science, Lund University, BMC C13, 22 184, Lund, Sweden.
Paulina RegenthalDepartment of Experimental Medical Science, Lund University, BMC C13, 22 184, Lund, Sweden.
Christopher BahlDepartment of Biochemistry, University of Washington, and Howard Hughes Medical Institute, Seattle, Washington 98195, USA.
Alex FordDepartment of Biochemistry, University of Washington, and Howard Hughes Medical Institute, Seattle, Washington 98195, USA.
David BakerDepartment of Biochemistry, University of Washington, and Howard Hughes Medical Institute, Seattle, Washington 98195, USA.
Karin Lindkvist-PeterssonDepartment of Experimental Medical Science, Lund University, BMC C13, 22 184, Lund, Sweden.
Howard Hughes Medical Institute · USLund University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Superantigens are toxins produced by Staphylococcus aureus, called staphylococcal enterotoxins (abbreviated SEA to SEU). They can cross-link the T cell receptor (TCR) and major histocompatibility complex class II, triggering a massive T cell activation and hence disease. Due to high stability and toxicity, superantigens are potential agents of bioterrorism. Hence, antagonists may not only be useful in the treatment of disease but also serve as countermeasures to biological warfare. Of particular interest are inhibitors against SEA and SEB. SEA is the main cause of food poisoning, while SEB is a common toxin manufactured as a biological weapon. Here, we present the crystal structures of SEA in complex with TCR and SEE in complex with the same TCR, complemented with computational alanine-scanning mutagenesis of SEA, SEB, SEC3, SEE, and SEH. We have identified two common areas that contribute to the general TCR binding for these superantigens. This paves the way for design of single antagonists directed towards multiple toxins.

Indexed as

Amino Acid MotifsAmino Acid SequenceCrystallography, X-RayEnterotoxinsHydrogen BondingModels, MolecularMutagenesisProtein Structure, SecondaryReceptors, Antigen, T-CellSuperantigensEnterotoxinsReceptors, Antigen, T-CellSuperantigens

Identifiers

PMID27180909
PMCPMC4867771
OpenAlexW2404945014

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.