Evidence map›Paper›PMID 27180883›Full record

ArticleScientific reports2016

Effects of ADMA on gene expression and metabolism in serum-starved LoVo cells.

Ningning Zheng, Ke Wang, Jiaojiao He, Yunping Qiu, Guoxiang Xie, Mingming Su, Wei Jia, Houkai Li

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
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  3. Review
  4. Article
  5. Article
  6. Metabolic Oscillations and Glycolytic Phenotypes of Cancer Cells.International journal of molecular sciences · 2023
    Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Serum starvation enhances nonsense mutation readthrough.Journal of molecular medicine (Berlin, Germany) · 2019
    Article
  16. Article
  17. Article
  18. Review
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Ningning ZhengCenter for Chinese Medical Therapy and Systems Biology, Shanghai University of Traditional Chinese MedicineShanghai 201203, China.
Ke WangLaboratory of Integrative Medicine Surgery, Shuguang Hospital, Shanghai University of Traditional Chinese Medicine, Shanghai 201203, China.
Jiaojiao HeCenter for Chinese Medical Therapy and Systems Biology, Shanghai University of Traditional Chinese MedicineShanghai 201203, China.
Yunping QiuStable Isotope and Metabolomics Core Facility, Diabetes Center Albert Einstein College of Medicine, 1300 Morris Part Ave, Bronx, New York 10461, USA.
Guoxiang XieCancer Epidemiology Program, University of Hawaii Cancer Center, Honolulu, Hawaii 96813, USA.
Mingming SuCancer Epidemiology Program, University of Hawaii Cancer Center, Honolulu, Hawaii 96813, USA.
Wei JiaCenter for Chinese Medical Therapy and Systems Biology, Shanghai University of Traditional Chinese MedicineShanghai 201203, China.
Houkai LiCenter for Chinese Medical Therapy and Systems Biology, Shanghai University of Traditional Chinese MedicineShanghai 201203, China.
Shanghai University of Traditional Chinese Medicine · CNUniversity of Hawaiʻi at Mānoa · USAlbert Einstein College of Medicine · USCancer Center of Hawaii · US

Funding

University of Hawaii Cancer Center CCSGP30CA071789 · NCI · UNIVERSITY OF HAWAII AT MANOA · PI GERTRAUD MASKARINEC · 1996 to 2026
$56.2M
NCI NIH HHS P30 CA071789
6 · The paper itself

Abstract

Serum starvation is a typical way for inducing tumor cell apoptosis and stress. Asymmetric dimethylarginine (ADMA) is an endogenous metabolite. Our previous study reveals the plasma ADMA level is elevated in colon cancer patients, which can attenuate serum starvation-induced apoptosis in LoVo cells. In current study, we evaluated the effects of ADMA on gene expression and metabolism in serum-starved LoVo cells with gene microarray and metabolomic approaches. Our results indicated that 96 h serum starvation induced comprehensive alterations at transcriptional level, and most of them were restored by ADMA. The main signaling pathways induced by serum starvation included cancers-related pathways, pathways in cell death, apoptosis, and cell cycle etc. Meanwhile, the metabolomic data showed serum-starved cells were clearly separated with control cells, but not with ADMA-treated cells in PCA model. The identified differential metabolites indicated serum starvation significantly suppressed TCA cycle, altered glucose and fatty acids metabolism, as well as nucleic acids metabolism. However, very few differential metabolites were identified between ADMA and serum-starved cells. In summary, our current results indicated serum starvation profoundly altered the gene expression and metabolism of LoVo cells, whereas ADMA could restore most of the changes at transcriptional level, but not at metabolic level.

Indexed as

ApoptosisArginineCell CycleCell Line, TumorColonic NeoplasmsCulture MediaFatty AcidsFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansMaleMetabolomeMetabolomicsNucleic AcidsArginineCulture MediaFatty AcidsN,N-dimethylarginineNucleic Acids

Identifiers

PMID27180883
PMCPMC4867623
OpenAlexW2405707907

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.