Evidence map›Paper›PMID 27180831›Full record

ArticlePharmacogenomics2016

Previously reported PDE3A-SLCO1C1 genetic variant does not correlate with anti-TNF response in a large UK rheumatoid arthritis cohort.

Samantha Louise Smith, Darren Plant, Xiu Hue Lee, Jonathan Massey, Kimme Hyrich, Ann W Morgan, Anthony G Wilson, John Isaacs, Anne Barton

Abstract read
In one paragraph

Article in Pharmacogenomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Samantha Louise SmithArthritis Research UK, Centre for Genetics & Genomics, Centre for Musculoskeletal Research, Manchester Academic Health Sciences Centre, The University of Manchester, Manchester, UK.
Darren PlantNIHR Manchester Musculoskeletal BRU, Central Manchester Foundation Trust & University of Manchester, Manchester Academic Health Science Centre, Manchester, UK.
Xiu Hue LeeArthritis Research UK, Centre for Genetics & Genomics, Centre for Musculoskeletal Research, Manchester Academic Health Sciences Centre, The University of Manchester, Manchester, UK.
Jonathan MasseyArthritis Research UK, Centre for Genetics & Genomics, Centre for Musculoskeletal Research, Manchester Academic Health Sciences Centre, The University of Manchester, Manchester, UK.
Kimme HyrichArthritis Research UK, Centre for Epidemiology, Centre for Musculoskeletal Research, Manchester Academic Health Sciences Centre, The University of Manchester, Manchester, UK.
Ann W MorganLeeds Institute of Rheumatic and Musculoskeletal Medicine, University of Leeds & NIHR Leeds Musculoskeletal Biomedical Research Unit, Leeds Teaching Hospitals NHS Trust, UK.
Anthony G WilsonUCD School of Medicine & Medical Science, Conway Institute, University College Dublin, Dublin, Ireland.
John IsaacsNIHR Newcastle Biomedical Research Centre, Newcastle upon Tyne NHS Foundation Trust & Newcastle University, Newcastle-upon-Tyne, UK.
Anne BartonArthritis Research UK, Centre for Genetics & Genomics, Centre for Musculoskeletal Research, Manchester Academic Health Sciences Centre, The University of Manchester, Manchester, UK.

Funding

Medical Research Council G1001518Versus Arthritis 20747
6 · The paper itself

Abstract

aimA genetic variant has recently reached genome-wide significance for association with TNF-inhibitor response in rheumatoid arthritis patients. Here we undertake a replication study in a UK Caucasian population to test for association with TNF-inhibitor response. MATERIALS &

methodsThe genetic variant, rs3794271, located within the PDE3A-SLCO1C1 locus was analyzed for correlation with treatment response using both the EULAR classification criteria and absolute change in (Δ)DAS28 scores as outcome measures.

resultsGenotype data were available from 1750 TNF-inhibitor treated individuals. However, no evidence for association was observed (EULAR: p = 0.91 and ΔDAS28: p = 0.93). Furthermore, no significant associations were observed upon stratification by the anti-TNF received (p > 0.05).

conclusionIn the largest replication cohort conducted to date, no evidence for association was observed.

Indexed as

Pharmacogenomic VariantsAdultAgedAntirheumatic AgentsArthritis, RheumatoidCohort StudiesCyclic Nucleotide Phosphodiesterases, Type 3FemaleGenetic Association StudiesHumansMaleMiddle AgedOrganic Anion TransportersPharmacogenomic TestingPolymorphism, Single NucleotideTreatment OutcomeAntirheumatic AgentsCyclic Nucleotide Phosphodiesterases, Type 3Organic Anion TransportersPDE3A protein, humanSLCO1C1 protein, humanTumor Necrosis Factor-alphabiomarkerrheumatoid arthritissingle nucleotide polymorphismTNF inhibitorstreatment response

Identifiers

PMID27180831
PMCPMC4996314

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.