Evidence map›Paper›PMID 27179769›Full record

ArticleBiology direct2016

Biochemical and biophysical characterization of cell-free synthesized Rift Valley fever virus nucleoprotein capsids enables in vitro screening to identify novel antivirals.

Sean Broce, Lisa Hensley, Tomoharu Sato, Joshua Lehrer-Graiwer, Christian Essrich, Katie J Edwards, Jacqueline Pajda, Christopher J Davis, Rami Bhadresh, Clarence R Hurt and 4 more

Open access · goldAbstract read
In one paragraph

Article in Biology direct, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.4field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 2 countries.

Sean BroceProsetta Antiviral Inc, San Francisco, CA, USA.
Lisa HensleyNIAID, Ft Detrick, MD, USA.
Tomoharu SatoProsetta Antiviral Inc, San Francisco, CA, USA.
Joshua Lehrer-GraiwerProsetta Antiviral Inc, San Francisco, CA, USA.
Christian EssrichProsetta Antiviral Inc, San Francisco, CA, USA.
Katie J EdwardsCUBRC, Inc, Buffalo, NY, USA.
Jacqueline PajdaLife Technologies, Inc, Grand Island, NY, USA.
Christopher J DavisBiomedical Advanced Research & Development Authority, Office of the Assistant Secretary of Preparedness & Response, U.S. Department of Health & Human Services, Washington, DC, USA.
Rami BhadreshProsetta Antiviral Inc, San Francisco, CA, USA.
Clarence R HurtProsetta Antiviral Inc, San Francisco, CA, USA.
Beverly FreemanProsetta Antiviral Inc, San Francisco, CA, USA.
Vishwanath R LingappaProsetta Antiviral Inc, San Francisco, CA, USA.
Colm A KelleherProsetta Antiviral Inc, San Francisco, CA, USA.
Marcela V KarpujProsetta Antiviral Inc, San Francisco, CA, USA. mvkarpuj@bioa2z.com.
Calspan-University of Buffalo Research Center · USActionAid · USBiomedical Advanced Research and Development Authority · USDuPont (United States) · USGlobal Blood Therapeutics (United States) · USSyngene International (India) · IN

Funding

Integrated Research Facility at Fort DetrickZIDAI009006 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI COE, LINDA · 2009 to 2018
$341.7M
2016 SETAC Asia/Pacific ConferenceR13ES027302 · NIEHS · SOCIETY/ENVIRONMENTAL TOXICOLOGY/CHEM · PI MENZIE, CHARLES · 2016 to 2016
$6k
NIEHS NIH HHS 27302C0028
6 · The paper itself

Abstract

backgroundViral capsid assembly involves the oligomerization of the capsid nucleoprotein (NP), which is an essential step in viral replication and may represent a potential antiviral target. An in vitro transcription-translation reaction using a wheat germ (WG) extract in combination with a sandwich ELISA assay has recently been used to identify small molecules with antiviral activity against the rabies virus.

resultsHere, we examined the application of this system to viruses with capsids with a different structure, such as the Rift Valley fever virus (RVFV), the etiological agent of a severe emerging infectious disease. The biochemical and immunological characterization of the in vitro-generated RVFV NP assembly products enabled the distinction between intermediately and highly ordered capsid structures. This distinction was used to establish a screening method for the identification of potential antiviral drugs for RVFV countermeasures.

conclusionsThese results indicated that this unique analytical system, which combines nucleoprotein oligomerization with the specific immune recognition of a highly ordered capsid structure, can be extended to various viral families and used both to study the early stages of NP assembly and to assist in the identification of potential antiviral drugs in a cost-efficient manner. REVIEWERS: Reviewed by Jeffry Skolnick and Noah Isakov. For the full reviews please go to the Reviewers' comments section.

Indexed as

Drug Evaluation, PreclinicalAntiviral AgentsCapsidCell-Free SystemDrug DiscoveryNucleoproteinsRift Valley fever virusAntiviral AgentsNucleoproteinsAntiviralsCapsid nucleoprotein oligomerizationCell-free protein synthesisRift Valley fever virusWheat germ extracts

Identifiers

PMID27179769
PMCPMC4867995
OpenAlexW2377465425

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.