Evidence map›Paper›PMID 27175859›Full record

ArticleNature communications2016

Revealing the mechanism of passive transport in lipid bilayers via phonon-mediated nanometre-scale density fluctuations.

Mikhail Zhernenkov, Dima Bolmatov, Dmitry Soloviov, Kirill Zhernenkov, Boris P Toperverg, Alessandro Cunsolo, Alexey Bosak, Yong Q Cai

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 74 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Investigating Membrane-Mediated Antimicrobial Peptide Interactions with Synchrotron Radiation Far-Infrared Spectroscopy.Chemphyschem : a European journal of chemical physics and physical chemistry · 2022
    Article
  9. Article
  10. Article
  11. Functional lipid pairs as building blocks of phase-separated membranes.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  12. Article
  13. Article
  14. Impact of membrane curvature on amyloid aggregation.Biochimica et biophysica acta. Biomembranes · 2018
    Review
  15. Article
  16. Aspirin locally disrupts the liquid-ordered phase.Royal Society open science · 2018
    Article
  17. Three-Dimensional Microphase Separation and Synergistic Permeability in Stacked Lipid-Polymer Hybrid Membranes.Chemistry of materials : a publication of the American Chemical Society · 2017
    Article
  18. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 3 countries.

Mikhail ZhernenkovNational Synchrotron Light Source II, Brookhaven National Laboratory, Upton, New York 11973, USA.ORCID 0000-0003-3604-0672
Dima BolmatovNational Synchrotron Light Source II, Brookhaven National Laboratory, Upton, New York 11973, USA.
Dmitry SoloviovFrank Laboratory of Neutron Physics, Joint Institute for Nuclear Research, Dubna 141980, Russia.
Kirill ZhernenkovInstitut Nanosciences et Cryogénie, Commissariat à l'Energie Atomique, Grenoble 38054, France.
Boris P TopervergPetersburg Nuclear Physics Institute, Gatchina 188300, Russia.
Alessandro CunsoloNational Synchrotron Light Source II, Brookhaven National Laboratory, Upton, New York 11973, USA.
Alexey BosakEuropean Synchrotron Radiation Facility, Grenoble 38000, France.
Yong Q CaiNational Synchrotron Light Source II, Brookhaven National Laboratory, Upton, New York 11973, USA.
Brookhaven National Laboratory · USCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FREuropean Synchrotron Radiation Facility · FRInstitut Laue-Langevin · FRMoscow Institute of Physics and Technology · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The passive transport of molecules through a cell membrane relies on thermal motions of the lipids. However, the nature of transmembrane transport and the precise mechanism remain elusive and call for a comprehensive study of phonon excitations. Here we report a high resolution inelastic X-ray scattering study of the in-plane phonon excitations in 1,2-dipalmitoyl-sn-glycero-3-phosphocholine above and below the main transition temperature. In the gel phase, for the first time, we observe low-frequency transverse modes, which exhibit a phonon gap when the lipid transitions into the fluid phase. We argue that the phonon gap signifies the formation of short-lived nanometre-scale lipid clusters and transient pores, which facilitate the passive molecular transport across the bilayer plane. Our findings suggest that the phononic motion of the hydrocarbon tails provides an effective mechanism of passive transport, and illustrate the importance of the collective dynamics of biomembranes.

Indexed as

PhononsBiological TransportDimyristoylphosphatidylcholineLipid BilayersNanoparticlesX-RaysDimyristoylphosphatidylcholineLipid Bilayers

Identifiers

PMID27175859
PMCPMC4865866
OpenAlexW2355591382

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.