Evidence map›Paper›PMID 27174222›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2016

Suppressed recombination and unique candidate genes in the divergent haplotype encoding Fhb1, a major Fusarium head blight resistance locus in wheat.

W Schweiger, B Steiner, S Vautrin, T Nussbaumer, G Siegwart, M Zamini, F Jungreithmeier, V Gratl, M Lemmens, K F X Mayer and 3 more

Open access · hybridAbstract read
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed, 1 pooled it
26.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 1 synthesis or guideline pooled it, 119 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Pre-breeding to establishFrontiers in plant science · 2026
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  5. Transcriptional Response of Durum Wheat During Interaction withInternational journal of molecular sciences · 2026
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  12. Identification and Expressional Analysis of siRNAs Responsive toInternational journal of molecular sciences · 2023
    Article
  13. Article
  14. Pyramiding Fusarium head blight resistance QTL from T. aestivum, T. dicoccum and T. dicoccoides in durum wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  15. FHB resistance conferred by Fhb1 is under inhibitory regulation of two genetic loci in wheat (Triticum aestivum L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  16. Article
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  20. Gramiketides, Novel Polyketide Derivatives ofJournal of fungi (Basel, Switzerland) · 2022
    Article

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 3 countries.

W SchweigerInstitute for Biotechnology in Plant Production (IFA-Tulln), BOKU-University of Natural Resources and Life Sciences, Konrad Lorenz Strasse 20, 3430, Tulln, Austria. wolfgang.schweiger@boku.ac.at.
B SteinerInstitute for Biotechnology in Plant Production (IFA-Tulln), BOKU-University of Natural Resources and Life Sciences, Konrad Lorenz Strasse 20, 3430, Tulln, Austria.
S VautrinFrench Plant Genomic Resource Centre, INRA-CNRGV, Chemin de Borde Rouge, CS 52627, 31326, Castanet Tolosan, France.
T NussbaumerPlant Genome and Systems Biology, Helmholtz Zentrum München, 85764, Neuherberg, Germany.
G SiegwartInstitute for Biotechnology in Plant Production (IFA-Tulln), BOKU-University of Natural Resources and Life Sciences, Konrad Lorenz Strasse 20, 3430, Tulln, Austria.
M ZaminiInstitute for Biotechnology in Plant Production (IFA-Tulln), BOKU-University of Natural Resources and Life Sciences, Konrad Lorenz Strasse 20, 3430, Tulln, Austria.
F JungreithmeierInstitute for Biotechnology in Plant Production (IFA-Tulln), BOKU-University of Natural Resources and Life Sciences, Konrad Lorenz Strasse 20, 3430, Tulln, Austria.
V GratlInstitute for Biotechnology in Plant Production (IFA-Tulln), BOKU-University of Natural Resources and Life Sciences, Konrad Lorenz Strasse 20, 3430, Tulln, Austria.
M LemmensInstitute for Biotechnology in Plant Production (IFA-Tulln), BOKU-University of Natural Resources and Life Sciences, Konrad Lorenz Strasse 20, 3430, Tulln, Austria.
K F X MayerPlant Genome and Systems Biology, Helmholtz Zentrum München, 85764, Neuherberg, Germany.
H BérgèsFrench Plant Genomic Resource Centre, INRA-CNRGV, Chemin de Borde Rouge, CS 52627, 31326, Castanet Tolosan, France.
G AdamDepartment of Applied Genetics and Cell Biology, BOKU-University of Natural Resources and Life Sciences, Konrad Lorenz Strasse 22, 3430, Tulln, Austria.
H BuerstmayrInstitute for Biotechnology in Plant Production (IFA-Tulln), BOKU-University of Natural Resources and Life Sciences, Konrad Lorenz Strasse 20, 3430, Tulln, Austria.
BOKU University · ATGenomics and Biotechnology of the Fruits Laboratory · FRHelmholtz Zentrum München · DEUniversity of Vienna · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageFine mapping and sequencing revealed 28 genes in the non-recombining haplotype containing Fhb1 . Of these, only a GDSL lipase gene shows a pathogen-dependent expression pattern. Fhb1 is a prominent Fusarium head blight resistance locus of wheat, which has been successfully introgressed in adapted breeding material, where it confers a significant increase in overall resistance to the causal pathogen Fusarium graminearum and the fungal virulence factor and mycotoxin deoxynivalenol. The Fhb1 region has been resolved for the susceptible wheat reference genotype Chinese Spring, yet the causal gene itself has not been identified in resistant cultivars. Here, we report the establishment of a 1 Mb contig embracing Fhb1 in the donor line CM-82036. Sequencing revealed that the region of Fhb1 deviates from the Chinese Spring reference in DNA size and gene content, which explains the repressed recombination at the locus in the performed fine mapping. Differences in genes expression between near-isogenic lines segregating for Fhb1 challenged with F. graminearum or treated with mock were investigated in a time-course experiment by RNA sequencing. Several candidate genes were identified, including a pathogen-responsive GDSL lipase absent in susceptible lines. The sequence of the Fhb1 region, the resulting list of candidate genes, and near-diagnostic KASP markers for Fhb1 constitute a valuable resource for breeding and further studies aiming to identify the gene(s) responsible for F. graminearum and deoxynivalenol resistance.

Indexed as

Genetic LociRecombination, GeneticContig MappingDisease ResistanceFusariumGenotypeHaplotypesPlant DiseasesRNA, PlantSequence Analysis, RNATrichothecenesTriticumdeoxynivalenolRNA, PlantTrichothecenes

Identifiers

PMID27174222
PMCPMC4943984
OpenAlexW2365502812

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.