Evidence map›Paper›PMID 27174104›Full record

ArticleMolecular biology reports2016

Fragile sites of 45S rDNA of Lolium multiflorum are not hotspots for chromosomal breakages induced by X-ray.

Laiane Corsini Rocha, Andrea Mittelmann, Andreas Houben, Vânia Helena Techio

Abstract read
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Article in Molecular biology reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
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  4. DetectingInternational journal of molecular sciences · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Laiane Corsini RochaDepartment of Biology, Federal University of Lavras - UFLA, Lavras, Minas Gerais, Brazil.
Andrea MittelmannEmbrapa Dairy Cattle/Embrapa Temperate Agriculture, Juiz de Fora/Pelotas, Minas Gerais State/Rio Grande do Sul State, Brazil.
Andreas HoubenLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), OT Gatersleben, 06466, StadtSeeland, Germany. houben@ipk-gatersleben.de.
Vânia Helena TechioDepartment of Biology, Federal University of Lavras - UFLA, Lavras, Minas Gerais, Brazil. vhtechio@gmail.com.
Universidade Federal de Lavras · BRBrazilian Agricultural Research Corporation · BRLeibniz Institute of Plant Genetics and Crop Plant Research · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sites of 45S rDNA of Lolium are regions denominated fragile sites (FSs), constituting regions slightly stained with DAPI due to increased DNA unpacking in metaphasic chromosomes. Considered to be fragile regions in the genome, the FSs might be more responsive to induced breaks and result in chromosomal fragments and rearrangements, unless repairing mechanisms such as recombination or de novo telomere formation play a role at the break site of the DNA. Thus, this study aimed at investigating if SFs from Lolium are hotspots for the occurrence of breakages induced by X-ray and if they are regions favorable to synthesize new telomeres, using Hordeum vulgare as a comparative model. Lolium multiflorum and H. vulgare seedlings were irradiated with 20 and 50 Gy X-ray and evaluated one day following the irradiation and at 7-days intervals for a 28-days period, using FISH technique with 45S rDNA and Arabidopsis-type telomere probes in order to investigate the presence of chromosomal breakages and new telomere formation. H. vulgare did not survive after a few days of irradiation due to the increased rate of abnormalities. L. multiflorum also exhibited chromosomal abnormalities following the exposure, yet over the 28-days trial it had a decrease in the chromosomal damage rate and formation of de novo telomere has not been detected along this time. Despite being considered to be fragile regions in the genome, the 45S rDNA sites of Lolium are not hotspots to chromosomal breakages after the induction of breakages.

Indexed as

Chromosome BreakageChromosome Fragile SitesGenes, PlantLoliumMetaphaseRNA, PlantRNA, RibosomalX-RaysRNA, PlantRNA, RibosomalRNA, ribosomal, 45SBarleyChromosomal abnormalitiesDe novo telomere formationDNA repairIonizing radiationRyegrass

Identifiers

PMID27174104
OpenAlexW2472626261

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.