Evidence map›Paper›PMID 27172208›Full record

ArticleG3 (Bethesda, Md.)2016

A Genetic Map Between Gossypium hirsutum and the Brazilian Endemic G. mustelinum and Its Application to QTL Mapping.

Baohua Wang, Limei Liu, Dong Zhang, Zhimin Zhuang, Hui Guo, Xin Qiao, Lijuan Wei, Junkang Rong, O Lloyd May, Andrew H Paterson and 1 more

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. GBS Mapping and Analysis of Genes Conserved betweenInternational journal of molecular sciences · 2018
    Article
  8. Genetic Analysis ofThe plant genome · 2018
    Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Baohua WangPlant Genome Mapping Laboratory, University of Georgia, Athens, Georgia 30602 School of Life Sciences, Nantong University, Nantong, Jiangsu 226019, China Department of Crop and Soil Sciences, University of Georgia, Tifton, Georgia 31793.ORCID 0000-0001-7449-8292
Limei LiuDepartment of Crop and Soil Sciences, University of Georgia, Tifton, Georgia 31793.
Dong ZhangPlant Genome Mapping Laboratory, University of Georgia, Athens, Georgia 30602.
Zhimin ZhuangSchool of Life Sciences, Nantong University, Nantong, Jiangsu 226019, China Department of Crop and Soil Sciences, University of Georgia, Tifton, Georgia 31793.
Hui GuoPlant Genome Mapping Laboratory, University of Georgia, Athens, Georgia 30602.
Xin QiaoPlant Genome Mapping Laboratory, University of Georgia, Athens, Georgia 30602.
Lijuan WeiPlant Genome Mapping Laboratory, University of Georgia, Athens, Georgia 30602.
Junkang RongPlant Genome Mapping Laboratory, University of Georgia, Athens, Georgia 30602 School of Agriculture and Food Science, Zhejiang A&F University, Lin'an, Hangzhou, Zhejiang 311300, China.
O Lloyd MayDepartment of Crop and Soil Sciences, University of Georgia, Tifton, Georgia 31793.
Andrew H PatersonPlant Genome Mapping Laboratory, University of Georgia, Athens, Georgia 30602 paterson@uga.edu pwchee@uga.edu.
Peng W CheeDepartment of Crop and Soil Sciences, University of Georgia, Tifton, Georgia 31793 paterson@uga.edu pwchee@uga.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Among the seven tetraploid cotton species, little is known about transmission genetics and genome organization in Gossypium mustelinum, the species most distant from the source of most cultivated cotton, G. hirsutum In this research, an F2 population was developed from an interspecific cross between G. hirsutum and G. mustelinum (HM). A genetic linkage map was constructed mainly using simple sequence repeat (SSRs) and restriction fragment length polymorphism (RFLP) DNA markers. The arrangements of most genetic loci along the HM chromosomes were identical to those of other tetraploid cotton species. However, both major and minor structural rearrangements were also observed, for which we propose a parsimony-based model for structural divergence of tetraploid cottons from common ancestors. Sequences of mapped markers were used for alignment with the 26 scaffolds of the G. hirsutum draft genome, and showed high consistency. Quantitative trait locus (QTL) mapping of fiber elongation in advanced backcross populations derived from the same parents demonstrated the value of the HM map. The HM map will serve as a valuable resource for QTL mapping and introgression of G. mustelinum alleles into G. hirsutum, and help clarify evolutionary relationships between the tetraploid cotton genomes.

Indexed as

Chromosome MappingGenome, PlantGenomicsQuantitative Trait LociChromosomes, PlantCrosses, GeneticGenetic Association StudiesGenetic LinkageGossypiumPhylogenyPhysical Chromosome MappingQuantitative Trait, HeritableTetraploidychromosome structural changescolinearitymap comparisonphylogenetic context

Identifiers

PMID27172208
PMCPMC4889663

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.