Evidence map›Paper›PMID 27172138›Full record

ArticlePlant signaling & behavior2016

Transcriptomic analysis supports the role of CATION EXCHANGER 1 in cellular homeostasis and oxidative stress limitation during cadmium stress.

Cecilia Baliardini, Massimiliano Corso, Nathalie Verbruggen

Open access · bronzeAbstract read
In one paragraph

Article in Plant signaling & behavior, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
4.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Cadmium and Plant Development: An Agony from Seed to Seed.International journal of molecular sciences · 2019
    Review
  6. Endoplasmic reticulum-localized CCX2 is required for osmotolerance by regulating ER and cytosolic CaProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Cecilia Baliardinia Laboratory of Plant Physiology and Molecular Genetics , Université Libre de Bruxelles , Brussels , Belgium.
Massimiliano Corsoa Laboratory of Plant Physiology and Molecular Genetics , Université Libre de Bruxelles , Brussels , Belgium.
Nathalie Verbruggena Laboratory of Plant Physiology and Molecular Genetics , Université Libre de Bruxelles , Brussels , Belgium.
Université Libre de Bruxelles · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Investigation of genetic determinants of Cd tolerance in the Zn/Cd hyperaccumulator Arabidopsis halleri allowed the identification of the vacuolar Ca(2+)/H(+) exchanger encoding CAX1 gene. CAX1 was proposed to interfere with the positive feedback loop between Reactive Oxygen Species (ROS) production and Cd-induced cytosolic Ca(2+) spikes, especially at low external Ca(2+) supply. In this study expression of genes involved in ROS homeostasis, cell wall composition, apoplastic pH regulation and Ca(2+) homeostasis were monitored in Arabidopsis thaliana wild-type and cax1-1 knock-out mutant and in Arabidopsis halleri wild-type exposed to cadmium or in control conditions. Clustering the outputs of the expression analysis in a gene co-expression network revealed that CAX1 and genes involved in Ca(2+) cellular homeostasis, apoplastic pH and oxidative stress response were highly correlated in A. thaliana, but not in A. halleri. Many of the studied genes were already highly expressed in A. halleri and/or their expression was not modified by exposure to Cd. The results further supported the role of CAX1 in the regulation of cytosolic ROS accumulation as well as the existence of different cell wall modifications strategies in response to Cd in Arabidopsis thaliana and halleri.

Indexed as

ArabidopsisArabidopsis ProteinsCadmiumGene Expression ProfilingGene Expression Regulation, PlantGene Regulatory NetworksGenes, PlantHomeostasisHydrogen-Ion ConcentrationOxidative StressPrincipal Component AnalysisReal-Time Polymerase Chain ReactionStress, PhysiologicalArabidopsis ProteinsCadmiumArabidopsisCAX1cell wallmetal contaminationoxidative stress

Identifiers

PMID27172138
PMCPMC4973759
OpenAlexW2363027190

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.