Evidence map›Paper›PMID 27171374›Full record

ArticlePloS one2016

Use of Tunable Whole-Cell Bioreporters to Assess Bioavailable Cadmium and Remediation Performance in Soils.

Youngdae Yoon, Sunghoon Kim, Yooeun Chae, Yerin Kang, Youngshim Lee, Seung-Woo Jeong, Youn-Joo An

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Design of Pb(II)-SpecificFrontiers in microbiology · 2022
    Article
  7. Article
  8. Review
  9. Article
  10. Whole-Cell Microbial Bioreporter for Soil Contaminants Detection.Frontiers in bioengineering and biotechnology · 2021
    Review
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Youngdae YoonDepartment of Environmental Health Science, Konkuk University, Seoul 05029, Korea.
Sunghoon KimDepartment of Environmental Health Science, Konkuk University, Seoul 05029, Korea.
Yooeun ChaeDepartment of Environmental Health Science, Konkuk University, Seoul 05029, Korea.
Yerin KangDepartment of Environmental Health Science, Konkuk University, Seoul 05029, Korea.
Youngshim LeeDivision of Bioscience and Biotechnology, BMIC, Konkuk University, Seoul 05029, Korea.
Seung-Woo JeongDepartment of Environmental Engineering, Kunsan National University, Kunsan 54150, Korea.
Youn-Joo AnDepartment of Environmental Health Science, Konkuk University, Seoul 05029, Korea.
Konkuk University · KRKunsan National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

It is important to have tools to measure the bioavailability to assess the risks of pollutants because the bioavailability is defined as the portions of pollutants showing the biological effects on living organisms. This study described the construction of tunable Escherichia coli whole-cell bioreporter (WCB) using the promoter region of zinc-inducible operon and its application on contaminated soils. It was verified that this WCB system showed specific and sensitive responses to cadmium rather than zinc in the experimental conditions. It was inferred that Cd(II) associates stronger with ZntR, a regulatory protein of zinc-inducible operon, than other metal ions. Moreover, the expression of reporter genes, egfp and mcherry, were proportional to the concentration of cadmium, thereby being a quantitative sensor to monitor bioavailable cadmium. The capability to determine bioavailable cadmium was verified with Cd(II) amended LUFA soils, and then the applicability on environmental systems was investigated with field soils collected from smelter area in Korea before and after soil-washing. The total amount of cadmium was decreased after soil washing, while the bioavailability was increased. Consequently, it would be valuable to have tools to assess bioavailability and the effectiveness of soil remediation should be evaluated in the aspect of bioavailability as well as removal efficiency.

Indexed as

Genes, ReporterBiodegradation, EnvironmentalBiological AvailabilityCadmiumEnvironmental PollutionEscherichia coliGreen Fluorescent ProteinsIonsPlasmidsReference StandardsSoilSoil PollutantsZincCadmiumenhanced green fluorescent proteinGreen Fluorescent ProteinsIonsSoilSoil PollutantsZinc

Identifiers

PMID27171374
PMCPMC4865175
OpenAlexW2357803543

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.