Evidence map›Paper›PMID 27170062›Full record

ArticleJournal of atherosclerosis and thrombosis2016

A Rare Coincidence of Sitosterolemia and Familial Mediterranean Fever Identified by Whole Exome Sequencing.

Hayato Tada, Masa-Aki Kawashiri, Hirofumi Okada, Saori Endo, Yuka Toyoshima, Tetsuo Konno, Atsushi Nohara, Akihiro Inazu, Akira Takao, Hiroshi Mabuchi and 2 more

Open access · diamondAbstract readCase Reports
In one paragraph

Article in Journal of atherosclerosis and thrombosis, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Diagnosis and Management of Sitosterolemia 2021.Journal of atherosclerosis and thrombosis · 2021
    Review
  9. Article
  10. Review
  11. Article
  12. Post-prandial Remnant Lipoprotein Metabolism in Sitosterolemia.Journal of atherosclerosis and thrombosis · 2018
    Article
  13. Sitosterolemia, Hypercholesterolemia, and Coronary Artery Disease.Journal of atherosclerosis and thrombosis · 2018
    Review
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Hayato TadaDivision of Cardiovascular Medicine, Kanazawa University Graduate School of Medicine.
Masa-Aki Kawashiri
Hirofumi Okada
Saori Endo
Yuka Toyoshima
Tetsuo Konno
Atsushi Nohara
Akihiro Inazu
Akira Takao
Hiroshi Mabuchi
Masakazu Yamagishi
Kenshi Hayashi
Kanazawa University · JPGifu Municipal Hospital · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Whole exome sequencing (WES) technologies have accelerated genetic studies of Mendelian disorders, yielding approximately 30% diagnostic success. We encountered a 13-year-old Japanese female initially diagnosed with familial hypercholesterolemia on the basis of clinical manifestations of severe hypercholesterolemia (initial LDL cholesterol=609 mg/dl at the age of one) and systemic intertriginous xanthomas with histories of recurrent self-limiting episodes of fever and arthritis. Both her phenotypes seemed to co-segregate in a recessive manner. We performed WES on this patient, who was considered a proband. Among 206,430 variants found in this individual, we found 18,220 nonsense, missense, or splice site variants, of which 3,087 were rare (minor allele frequency ≤ 0.01 or not reported) in 1000 Genome (Asian population). Filtering by assuming a recessive pattern of inheritance with the use of an in silico annotation prediction tool, we successfully narrowed down the candidates to the compound heterozygous mutations in the ABCG5 gene (c.1256G>A or p.Arg419His/c.1763-1G>A [splice acceptor site]) and to the double-compound heterozygous mutations in the MEFV gene (c.329T>C/C or p.Leu110Pro/c.442G>C/C or p.Glu148Val). The patient was genetically diagnosed with sitosterolemia and familial Mediterranean fever using WES for the first time. Such a comprehensive approach is useful for identifying causative mutations for multiple unrelated inheritable diseases.

Indexed as

AdolescentATP Binding Cassette Transporter, Subfamily G, Member 5Cholesterol, LDLComputational BiologyExomeFamilial Mediterranean FeverFemaleGenome, HumanHigh-Throughput Nucleotide SequencingHumansHypercholesterolemiaIntestinal DiseasesLipid Metabolism, Inborn ErrorsLipoproteinsPhytosterolsPolymerase Chain ReactionABCG5 protein, humanATP Binding Cassette Transporter, Subfamily G, Member 5Cholesterol, LDLLipoproteinsPhytosterols

Identifiers

PMID27170062
PMCPMC7399263
OpenAlexW2346299663

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.